Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20agropyri_20[genbank_20GCA_5F900074905.1_202016-10-
26] 508 sequences; 52,477,121 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq487 322 4e-83
>seq487
Length=114140
Score = 322 bits (356), Expect = 4e-83
Identities = 657/966 (68%), Gaps = 9/966 (1%)
Strand=Plus/Minus
Query 65996 AACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATAC 66055
|| |||||| | |||||||| || | ||| || ||||| | ||||||||| || ||
Sbjct 16465 AAGTTGGGA-GAGCAAGAGAAGCCAAGTTACAAACAGCGACCTCGTCAGGTGCACAGTAT 16407
Query 66056 TCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTC 66115
|| || || || ||||| ||||| || ||| ||||| || | |||| |||||||||
Sbjct 16406 TCAACGATCTCTGTGCAGAGATTGGAGCTGCGGATGGTACCAAGGTTCTTCTGATTACTC 16347
Query 66116 TTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCA 66175
|| || ||||| ||||||||||| | |||| | || | |||||||| ||| | |||
Sbjct 16346 TTACGGTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCG 16287
Query 66176 ATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTT-TGCGTT 66233
| ||||| || |||||| | ||||| | || | | | |||| |||| ||| |
Sbjct 16286 AGGATGGAGTACCAAAGCTTCTGGGCCTTGATGGT-CTTGCGACCCTTGCCTTCTGCCT- 16229
Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293
|||| | ||||| || || || ||||| | || || | |||| || ||||
Sbjct 16228 CGTACTTCTCGTAAAGAGCCTCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGCACT 16169
Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353
|| || |||||||| | ||| ||||| || || ||||| ||| || ||||| |
Sbjct 16168 CGTTGGGGCACATCAGTGTCCATGTACCATTCTTCTCAACACGCTTCATGAAGAGATCTG 16109
Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413
| ||||| || ||||||||||||||||| || || ||||| | ||||| || || |
Sbjct 16108 GAATCCATAGAGCGTAGAAGAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTC 16049
Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473
| | || ||||||||||||| || || |||||||| || |||||||| ||||| | |
Sbjct 16048 GGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCAC 15989
Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533
| || || ||||| ||||| || || | || |||||||| || || | ||
Sbjct 15988 CAGGGCGCTTATTTCCACCCTGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGCA 15929
Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593
| || || | ||||| || || || || ||||| | ||| | ||| || || |
Sbjct 15928 TAGGAACAATACCGTTGGAGTTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGGCACGGA 15869
Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGC 66651
| ||| ||||||||||| || || || || |||| ||||| |||||| || |
Sbjct 15868 TTCTGTGGACATTCAGACCGATGCCTCCAGCATTCTTGGAGATCATGGCACAAGTCTTGA 15809
Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711
| | || | | || ||||| || ||| |||| ||| | | | ||||||||
Sbjct 15808 GAGTATC--GTAAATACCGTCGATACTGTCCTCCTTCATGTCGATCAAGAAGCATGAAGA 15751
Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771
||||| | || |||||| |||| | |||||||| || | ||||| |||||||| |
Sbjct 15750 GAGTTGTGCTTGTGGTGTGCCGGCGGCAAAGAGGGTTGGAGACGCGTGTGTAAAGTACTT 15691
Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831
|| ||||| ||||||| |||||||| || ||||| | || || ||||| || |
Sbjct 15690 GCTGGACATCAAATTGTATGTCTCGATAGCACTCTCAATATCATCCCCGTGAATACCCAC 15631
Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAA 66891
|| || ||| | | || ||| || |||||| | | | ||| || | | | |
Sbjct 15630 AGCCACTCTCATGATCATGTGTTGTGGACGTTCGGCAATCTTGCCCTCGAGACGGAGAAG 15571
Query 66892 GTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCAC 66951
||| || | || || ||||||| |||||||| ||| |||||||| | ||| ||
Sbjct 15570 GTATGATCTCTCAAGAGTCTTGAATCCAAAGTATTGGTAGTTGAAATCCCGATCATAGAC 15511
Query 66952 GATGGC 66957
|||||
Sbjct 15510 AATGGC 15505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397565538557120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |