Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 9e-24
>seq1
Length=69581
Score = 116 bits (128), Expect = 9e-24
Identities = 198/282 (70%), Gaps = 10/282 (4%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||| | | ||||||||
Sbjct 9734 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 9675
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | ||||| ||| |||||||||||||
Sbjct 9674 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGA 9615
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATC-AAG---AGCTT---CGCGTT 179
|| | || | || ||||||| || | ||||| ||| || ||| ||||| ||
Sbjct 9614 CCCTCATAGGTAAGGCCGCCATTGATCGGGGTTTCCTTCGAAGCCAAGCTTATATTAGTC 9555
Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239
| || | | ||| |||||| ||| || ||||||| |||||| | |||| | | |
Sbjct 9554 AACTTAGCAAATCCGTTAACCAGCCGACATCGGGCAGAAATCACACTCAATACTTTGATT 9495
Query 240 T-TCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | | || ||||||||||| |||||| | ||||||||||
Sbjct 9494 TATTATCTTACTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 9453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260797932288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |