Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10-
26] 164 sequences; 55,639,110 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq145 331 7e-86
>seq145
Length=311005
Score = 331 bits (366), Expect = 7e-86
Identities = 659/966 (68%), Gaps = 9/966 (1%)
Strand=Plus/Minus
Query 65996 AACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATAC 66055
|| |||||| | |||||||| || | ||| || ||||| | ||||||||| || ||
Sbjct 105581 AAGTTGGGA-GAGCAAGAGAAGCCAAGTTACAAACAGCGACCTCGTCAGGTGCACAGTAT 105523
Query 66056 TCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTC 66115
|| || || || ||||| ||||| || ||| ||||| || | |||| |||||||||
Sbjct 105522 TCAACTATCTCTGTGCAGAGATTGGAGCTGCGGATGGTACCAAGGTTCTTCTGATTACTC 105463
Query 66116 TTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCA 66175
|| || ||||| ||||||||||| | |||| | || | |||||||| ||| | |||
Sbjct 105462 TTTCGGTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCG 105403
Query 66176 ATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTT-TGCGTT 66233
| ||||| || |||||| | ||||| | || | | | |||| |||| ||| |
Sbjct 105402 AGGATGGAGTACCAAAGCTTCTGGGCCTTGATGGT-CTTGCGACCCTTGCCTTCTGCCT- 105345
Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293
|||| | || ||||| || || ||||| | || || | |||| || ||||
Sbjct 105344 CGTACTTCTCATAGAGAGCCTCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGCACT 105285
Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353
|| || |||||||| | ||| ||||| || || ||||| ||| || ||||| |
Sbjct 105284 CGTTGGGGCACATCAGTGTCCATGTACCATTCTTCTCAACACGCTTCATGAAGAGATCTG 105225
Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413
| ||||| || ||||||||||||||||| || || ||||| | ||||| || || |
Sbjct 105224 GAATCCATAGAGCGTAGAAGAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTC 105165
Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473
| | || ||||||||||||| || || |||||||| || |||||||| ||||| | |
Sbjct 105164 GGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCAC 105105
Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533
| || || ||||| ||||| || || | || |||||||| || || | ||
Sbjct 105104 CAGGGCGCTTATTTCCACCCTGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGCA 105045
Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593
| || || | ||||| || || || || ||||| | ||| | ||| || || |
Sbjct 105044 TAGGAACAATACCGTTGGAGTTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGGCACGGA 104985
Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGC 66651
| ||| ||||||||||| ||||| || || |||| ||||| |||||| || |
Sbjct 104984 TTCTGTGGACATTCAGACCGATACCTCCAGCATTCTTGGAGATCATGGCACAAGTCTTGA 104925
Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711
| | || | | || ||||| || ||| |||| ||| | | | ||||||||
Sbjct 104924 GAGTATC--GTAAATCCCGTCGATACTGTCCTCCTTCATGTCGATCAAGAAGCATGAAGA 104867
Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771
||||| | || |||||| |||| | |||||||| || | ||||| |||||||| |
Sbjct 104866 GAGTTGTGCTTGTGGTGTGCCGGCGGCAAAGAGGGTTGGAGACGCGTGTGTAAAGTACTT 104807
Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831
|| ||||| ||||||| |||||||| || ||||| | || || ||||| ||||
Sbjct 104806 GCTGGACATTAAATTGTATGTCTCGATAGCACTCTCAATATCATCCCCGTGAATACCGAC 104747
Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAA 66891
|| || ||| | | || ||| || |||||| | | | ||| || | | | |
Sbjct 104746 AGCCACTCTCATGATCATGTGTTGTGGACGTTCGGCAATCTTGCCCTCGAGACGGAGAAG 104687
Query 66892 GTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCAC 66951
||| || | || || ||||||| |||||||| ||| |||||||| | ||| ||
Sbjct 104686 GTATGATCTCTCAAGAGTCTTGAATCCAAAGTATTGGTAGTTGAAATCCCGATCATAGAC 104627
Query 66952 GATGGC 66957
|||||
Sbjct 104626 AATGGC 104621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567205360960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |