Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20commune_20[genbank_20GCA_5F900074885.1_202016-10- 26] 164 sequences; 55,639,110 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq145 331 7e-86 >seq145 Length=311005 Score = 331 bits (366), Expect = 7e-86 Identities = 659/966 (68%), Gaps = 9/966 (1%) Strand=Plus/Minus Query 65996 AACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATAC 66055 || |||||| | |||||||| || | ||| || ||||| | ||||||||| || || Sbjct 105581 AAGTTGGGA-GAGCAAGAGAAGCCAAGTTACAAACAGCGACCTCGTCAGGTGCACAGTAT 105523 Query 66056 TCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTC 66115 || || || || ||||| ||||| || ||| ||||| || | |||| ||||||||| Sbjct 105522 TCAACTATCTCTGTGCAGAGATTGGAGCTGCGGATGGTACCAAGGTTCTTCTGATTACTC 105463 Query 66116 TTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCA 66175 || || ||||| ||||||||||| | |||| | || | |||||||| ||| | ||| Sbjct 105462 TTTCGGTTGCAAGCATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCGGTTTGCGCCTCG 105403 Query 66176 ATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTA-CCTT-TGCGTT 66233 | ||||| || |||||| | ||||| | || | | | |||| |||| ||| | Sbjct 105402 AGGATGGAGTACCAAAGCTTCTGGGCCTTGATGGT-CTTGCGACCCTTGCCTTCTGCCT- 105345 Query 66234 CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACT 66293 |||| | || ||||| || || ||||| | || || | |||| || |||| Sbjct 105344 CGTACTTCTCATAGAGAGCCTCAAATTCGTCACCGTAAACATCAGCAAGACCGGGGCACT 105285 Query 66294 TGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAG 66353 || || |||||||| | ||| ||||| || || ||||| ||| || ||||| | Sbjct 105284 CGTTGGGGCACATCAGTGTCCATGTACCATTCTTCTCAACACGCTTCATGAAGAGATCTG 105225 Query 66354 GTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGC 66413 | ||||| || ||||||||||||||||| || || ||||| | ||||| || || | Sbjct 105224 GAATCCATAGAGCGTAGAAGAGATCGCGAGCGCGAACTTCCTCCTTTCCGTGGTTCTTTC 105165 Query 66414 GCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGC 66473 | | || ||||||||||||| || || |||||||| || |||||||| ||||| | | Sbjct 105164 GGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCTCGAGGTAGATCGCGAAAGCAC 105105 Query 66474 CCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACA 66533 | || || ||||| ||||| || || | || |||||||| || || | || Sbjct 105104 CAGGGCGCTTATTTCCACCCTGGTCAACATATCTGGCTGTGTTGTTGAAAACTCGGAGCA 105045 Query 66534 TCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTA 66593 | || || | ||||| || || || || ||||| | ||| | ||| || || | Sbjct 105044 TAGGAACAATACCGTTGGAGTTCCCGTTTGTGCCAGCAATGTAAGCTCCAGTGGCACGGA 104985 Query 66594 TATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAA-TC-GGC 66651 | ||| ||||||||||| ||||| || || |||| ||||| |||||| || | Sbjct 104984 TTCTGTGGACATTCAGACCGATACCTCCAGCATTCTTGGAGATCATGGCACAAGTCTTGA 104925 Query 66652 CACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACT 66711 | | || | | || ||||| || ||| |||| ||| | | | |||||||| Sbjct 104924 GAGTATC--GTAAATCCCGTCGATACTGTCCTCCTTCATGTCGATCAAGAAGCATGAAGA 104867 Query 66712 AAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATG 66771 ||||| | || |||||| |||| | |||||||| || | ||||| |||||||| | Sbjct 104866 GAGTTGTGCTTGTGGTGTGCCGGCGGCAAAGAGGGTTGGAGACGCGTGTGTAAAGTACTT 104807 Query 66772 GCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAG 66831 || ||||| ||||||| |||||||| || ||||| | || || ||||| |||| Sbjct 104806 GCTGGACATTAAATTGTATGTCTCGATAGCACTCTCAATATCATCCCCGTGAATACCGAC 104747 Query 66832 TGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAA 66891 || || ||| | | || ||| || |||||| | | | ||| || | | | | Sbjct 104746 AGCCACTCTCATGATCATGTGTTGTGGACGTTCGGCAATCTTGCCCTCGAGACGGAGAAG 104687 Query 66892 GTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCAC 66951 ||| || | || || ||||||| |||||||| ||| |||||||| | ||| || Sbjct 104686 GTATGATCTCTCAAGAGTCTTGAATCCAAAGTATTGGTAGTTGAAATCCCGATCATAGAC 104627 Query 66952 GATGGC 66957 ||||| Sbjct 104626 AATGGC 104621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567205360960