Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhynchosporium_20secalis_20[genbank_20GCA_5F900074895.1_202016-10- 26] 2,130 sequences; 49,411,302 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq816 86.0 2e-11 >seq816 Length=170108 Score = 86.0 bits (94), Expect = 2e-11 Identities = 113/153 (74%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||| | | | ||||||||||| | || ||||| || || | Sbjct 58725 CAATTGTCATACGAGATGGAATAGCGTGGGGGTTGATGATCAAATCCGGCACGATACCCT 58784 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCA 364543 || || ||||||||||| || || | | ||| ||| ||||| ||||| || | Sbjct 58785 GGCAAGTGAATGGCATATCTTCATGACGGTAAG-TGATACCGATGGTACCCTTCTGTCCG 58843 Query 364544 TAGCGAGAAGCAAACTTGTCGCCAATGACTGGG 364576 | |||||| ||||| || || ||||| ||||| Sbjct 58844 TGGCGAGAGGCAAATTTATCACCAAT--CTGGG 58874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884834960272090