Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01]
239 sequences; 44,257,831 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq42 224 1e-56
>seq42
Length=387416
Score = 224 bits (248), Expect = 1e-56
Identities = 190/229 (83%), Gaps = 5/229 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| || ||||||||| ||||||||||||||| |
Sbjct 166047 GTACAAAGGGCAGGGACGTAATCAACGCAAG-TTGATGACTTACGCTTACTAGGAATT-C 165990
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | ||||||
Sbjct 165989 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACAGAGTTTAACAAGATT 165930
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||| | || | |||| || |||| || | |||||||| ||||||||||
Sbjct 165929 ACCCAAGTATCTCTACTAAGGAAGTA--CTCGCTGTCTCTGTCAGTGTAACGCGCGTGCG 165872
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 165871 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCATCCAACTTCC 165823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751998258885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |