Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01]
239 sequences; 44,257,831 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq42 473 2e-131
>seq42
Length=387416
Score = 473 bits (524), Expect = 2e-131
Identities = 294/314 (94%), Gaps = 1/314 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||| ||||||||||||||| |||||||| || |||||||||||||||||| |||||
Sbjct 164299 TGGTTCGGCCGGGCCTTTCCCTCTGGGGAGCCCTATGCCCTTCACTGGGTGTAGTGGGGA 164358
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 164359 ACCAGGACTTTTACTGTGAAAAAATTAGAGTGTTCAAAGCAGGCATTTGCTCGAATACAT 164418
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 164419 CAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 164478
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct 164479 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 164538
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 164539 ATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 164597
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 164598 ACGAAAGTTAGGGG 164611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915197812672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |