Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01]
239 sequences; 44,257,831 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq42 760 0.0
>seq42
Length=387416
Score = 760 bits (842), Expect = 0.0
Identities = 576/667 (86%), Gaps = 14/667 (2%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 166957 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 167016
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 167017 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 167076
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| ||
Sbjct 167077 TGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTT 167136
Query 203 GCAACCAGAC--TTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACTCTTCTGC 259
|| ||||||| || || | | | ||| |||| ||| |||||||||| || |
Sbjct 167137 GCGACCAGACCTTTTCCTGGCG--GATCATCCGGTGTTCTCA-CCGGTGCACT--TCGCC 167191
Query 260 -GGTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317
|||| ||||||||||| | | |||| ||||||| || | ||||| || || || |
Sbjct 167192 AGGTCGAGGCCAGCATCGGTTTCCGCGGGGGGATAAAAGCTCTGGGAACGTAGCTCC--T 167249
Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG- 376
| ||| |||||||||||| | ||| | ||||| |||| |||| ||||||||
Sbjct 167250 CCGGGAGTGTTATAGCCCTCTGCACAATACC-CCCGCGGGGACCGAGGACCGCGCTCTAA 167308
Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436
|| |||||||||||||||||||||| | || ||||||||| ||||||||||||||||||
Sbjct 167309 GCAAGGATGCTGGCGTAATGGTTGTCAACGACCCGTCTTGAAACACGGACCAAGGAGTCG 167368
Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496
||||| | |||||||||||||||||||||||| ||||||||||| ||||||| |||||
Sbjct 167369 AACATTTGTGCGAGTGTTTGGGTGTCAAACCCTCACGCGTAATGAAGGTGAACGTAGGTG 167428
Query 497 GGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556
|| ||| | ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 167429 AGAGCCCTTACGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 167488
Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616
||||| ||||| ||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 167489 GCATAACTGTTCGGACCCGAAAGATGGTGAACTATGCGTGGATAGGGTGAAGCCAGAGGA 167548
Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676
||||||||||||||||||||||||||||| ||||||||||||||||||||| || | ||
Sbjct 167549 AACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGCGCATG 167608
Query 677 GGGGCGA 683
|||||||
Sbjct 167609 GGGGCGA 167615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079994873450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |