Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq42 760 0.0 >seq42 Length=387416 Score = 760 bits (842), Expect = 0.0 Identities = 576/667 (86%), Gaps = 14/667 (2%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 166957 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 167016 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 167017 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 167076 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| || Sbjct 167077 TGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTT 167136 Query 203 GCAACCAGAC--TTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACTCTTCTGC 259 || ||||||| || || | | | ||| |||| ||| |||||||||| || | Sbjct 167137 GCGACCAGACCTTTTCCTGGCG--GATCATCCGGTGTTCTCA-CCGGTGCACT--TCGCC 167191 Query 260 -GGTC-AGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 |||| ||||||||||| | | |||| ||||||| || | ||||| || || || | Sbjct 167192 AGGTCGAGGCCAGCATCGGTTTCCGCGGGGGGATAAAAGCTCTGGGAACGTAGCTCC--T 167249 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG- 376 | ||| |||||||||||| | ||| | ||||| |||| |||| |||||||| Sbjct 167250 CCGGGAGTGTTATAGCCCTCTGCACAATACC-CCCGCGGGGACCGAGGACCGCGCTCTAA 167308 Query 377 GCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCT 436 || |||||||||||||||||||||| | || ||||||||| |||||||||||||||||| Sbjct 167309 GCAAGGATGCTGGCGTAATGGTTGTCAACGACCCGTCTTGAAACACGGACCAAGGAGTCG 167368 Query 437 AACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTG 496 ||||| | |||||||||||||||||||||||| ||||||||||| ||||||| ||||| Sbjct 167369 AACATTTGTGCGAGTGTTTGGGTGTCAAACCCTCACGCGTAATGAAGGTGAACGTAGGTG 167428 Query 497 GGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 556 || ||| | ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 167429 AGAGCCCTTACGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGA 167488 Query 557 GCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGA 616 ||||| ||||| ||||||||||||||||||||||||| || ||||||||||||||||||| Sbjct 167489 GCATAACTGTTCGGACCCGAAAGATGGTGAACTATGCGTGGATAGGGTGAAGCCAGAGGA 167548 Query 617 AACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATA 676 ||||||||||||||||||||||||||||| ||||||||||||||||||||| || | || Sbjct 167549 AACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGCGCATG 167608 Query 677 GGGGCGA 683 ||||||| Sbjct 167609 GGGGCGA 167615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079994873450