Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01]
239 sequences; 44,257,831 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq91 105 2e-20
>seq91
Length=115133
Score = 105 bits (116), Expect = 2e-20
Identities = 196/283 (69%), Gaps = 16/283 (6%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| || ||||||||||||||| | ||||||||
Sbjct 43302 TAAACTGTATCTGCACAGTTATGCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 43243
Query 67 ATCGTTACGCCATTCGTGC-AGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125
|||||||| ||||| ||| | | | | | ||| | | ||||| ||| ||||||||||||
Sbjct 43242 ATCGTTACATCATTCATGCAAAGACTGCATTTAACAGTCAAGGTATTCCGCTACCTTAGG 43183
Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGT 178
||| | | | || ||||||| || ||||||| ||| || | | || ||
Sbjct 43182 ACCCTCA-AGATAAGGCCGCCATTAACCGGGGGTTCCTACAGTACCAAACCTTTTAAAGT 43124
Query 179 TAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
||| || | ||| || |||||||||||||| |||||| |||||| | ||
Sbjct 43123 TAGTTA----TTTTCGTTAGCCAGCCGGCACCGGGCAGAAATCACACTCTATACTTAGAC 43068
Query 239 TTT-CGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
||| || || |||| |||||| |||||| | ||||||||||
Sbjct 43067 TTTAAGTCTTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 43025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260796986688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |