Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq91 105 2e-20 >seq91 Length=115133 Score = 105 bits (116), Expect = 2e-20 Identities = 196/283 (69%), Gaps = 16/283 (6%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| || ||||||||||||||| | |||||||| Sbjct 43302 TAAACTGTATCTGCACAGTTATGCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 43243 Query 67 ATCGTTACGCCATTCGTGC-AGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125 |||||||| ||||| ||| | | | | | ||| | | ||||| ||| |||||||||||| Sbjct 43242 ATCGTTACATCATTCATGCAAAGACTGCATTTAACAGTCAAGGTATTCCGCTACCTTAGG 43183 Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-------TTCGCGT 178 ||| | | | || ||||||| || ||||||| ||| || | | || || Sbjct 43182 ACCCTCA-AGATAAGGCCGCCATTAACCGGGGGTTCCTACAGTACCAAACCTTTTAAAGT 43124 Query 179 TAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 ||| || | ||| || |||||||||||||| |||||| |||||| | || Sbjct 43123 TAGTTA----TTTTCGTTAGCCAGCCGGCACCGGGCAGAAATCACACTCTATACTTAGAC 43068 Query 239 TTT-CGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 ||| || || |||| |||||| |||||| | |||||||||| Sbjct 43067 TTTAAGTCTTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCG 43025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260796986688