Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq42 322 8e-86 >seq42 Length=387416 Score = 322 bits (356), Expect = 8e-86 Identities = 229/259 (88%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| || ||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 165905 TACTCGCTGTCTCTGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 165846 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 |||||||||||| || |||||||| ||| |||| |||||||||||||||||||||| Sbjct 165845 ACCTGTTATTGCATCCAACTTCCACCCGCTT-AAGCGGATAGTCCCTCTAAGAAGCCAGC 165787 Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | ||| || | || |||||||||||||||| || |||||||||||||||| |||| Sbjct 165786 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTAAATGTCTCGTTCGTTATCGCAATT 165728 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 165727 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 165668 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 165667 AAAGAGCTCTCAATCTGTC 165649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798155159