Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01]
239 sequences; 44,257,831 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq42 322 8e-86
>seq42
Length=387416
Score = 322 bits (356), Expect = 8e-86
Identities = 229/259 (88%), Gaps = 3/259 (1%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| || ||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 165905 TACTCGCTGTCTCTGTCAGTGTAACGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 165846
Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120
|||||||||||| || |||||||| ||| |||| ||||||||||||||||||||||
Sbjct 165845 ACCTGTTATTGCATCCAACTTCCACCCGCTT-AAGCGGATAGTCCCTCTAAGAAGCCAGC 165787
Query 121 CACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179
| ||| || | || |||||||||||||||| || |||||||||||||||| ||||
Sbjct 165786 GTACTGCCAAAG-CAATACGGGCTATTTAGCAGGTAAATGTCTCGTTCGTTATCGCAATT 165728
Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239
|| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 165727 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAG 165668
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 165667 AAAGAGCTCTCAATCTGTC 165649
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796798155159
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |