Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq42 197 2e-48 >seq42 Length=387416 Score = 197 bits (218), Expect = 2e-48 Identities = 112/114 (98%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 170546 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 170487 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct 170486 TCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTT 170433 Score = 194 bits (214), Expect = 3e-47 Identities = 110/112 (98%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 175317 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 175258 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 ||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 175257 TCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAG 175206 Score = 161 bits (178), Expect = 2e-37 Identities = 89/89 (100%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 169927 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 169868 Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||| Sbjct 169867 TAGGCCACACTTTCATGGTTTGTATTCAC 169839 Score = 140 bits (154), Expect = 6e-31 Identities = 87/92 (95%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct 174844 TACTAAGCTGAATTACCATTGCGGTGA-GGTCATCAGTAGGGTAAAACTAACCTGTCTCA 174902 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 174903 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 174934 Score = 111 bits (122), Expect = 3e-22 Identities = 63/64 (98%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 171009 GGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 170950 Query 89 TATT 92 |||| Sbjct 170949 TATT 170946 Score = 111 bits (122), Expect = 3e-22 Identities = 63/64 (98%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 175780 GGTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 175721 Query 89 TATT 92 |||| Sbjct 175720 TATT 175717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854397957984