Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01]
239 sequences; 44,257,831 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq42 176 5e-42
>seq42
Length=387416
Score = 176 bits (194), Expect = 5e-42
Identities = 158/193 (82%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||
Sbjct 164469 CTAGAAACCAACAAAATAGAACCACACGTCCTATTCTATTATTCCATGCTGATGTATTCG 164410
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| | |||||||||||||||||||||||| ||| ||||||||||||||||| | |
Sbjct 164409 AGCAAATGCCTGCTTTGAACACTCTAATTTTTTCACAGTAAAAGTCCTGGTTCCCCACTA 164350
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCA-AGAGGTAGGGCTGGGTAATGCAGTACTCGC 182
|| ||| |||| |||||| |||||| ||| || | ||| | || | |||| | |||
Sbjct 164349 CACCCAGTGAAGGGCATA-GGGCTCCCCAGAGGGAAAGGCCCGGCCGAACCAGTGCACGC 164291
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 164290 GGTGAGGCGGACC 164278
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595198621926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |