Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01]
239 sequences; 44,257,831 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq42 370 2e-100
>seq42
Length=387416
Score = 370 bits (410), Expect = 2e-100
Identities = 268/309 (87%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||| || ||||||||||||||| | |||||||| | ||| ||||||||||
Sbjct 165740 GAACGAGACATTTACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 165799
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
|||||||||| ||| |||| | |||||||| || ||||||||||||||||||||||||||
Sbjct 165800 AGGGACTATCCGCTTAAGCGGGTGGAAGTTGGATGCAATAACAGGTCTGTGATGCCCTTA 165859
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
|||||||||||||||||||||| ||||||||||||| || ||||| | | |||| | |
Sbjct 165860 GATGTTCTGGGCCGCACGCGCGTTACACTGACAGAGACAGCGAGTACTT--CCTTAGTAG 165917
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 165918 AGATACTTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 165977
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| ||||||||||| ||||||| | ||||||||||||||||||
Sbjct 165978 CTCTTCAACGAGGAATTCCTAGTAAGCGTAAGTCATCAACTTGCGTTGATTACGTCCCTG 166037
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 166038 CCCTTTGTA 166046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947197736192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |