Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq42 370 2e-100 >seq42 Length=387416 Score = 370 bits (410), Expect = 2e-100 Identities = 268/309 (87%), Gaps = 2/309 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||| || ||||||||||||||| | |||||||| | ||| |||||||||| Sbjct 165740 GAACGAGACATTTACCTGCTAAATAGCCCGTATTGCTTTGGCAGTACGCTGGCTTCTTAG 165799 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139 |||||||||| ||| |||| | |||||||| || |||||||||||||||||||||||||| Sbjct 165800 AGGGACTATCCGCTTAAGCGGGTGGAAGTTGGATGCAATAACAGGTCTGTGATGCCCTTA 165859 Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199 |||||||||||||||||||||| ||||||||||||| || ||||| | | |||| | | Sbjct 165860 GATGTTCTGGGCCGCACGCGCGTTACACTGACAGAGACAGCGAGTACTT--CCTTAGTAG 165917 Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 165918 AGATACTTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 165977 Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 |||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||| Sbjct 165978 CTCTTCAACGAGGAATTCCTAGTAAGCGTAAGTCATCAACTTGCGTTGATTACGTCCCTG 166037 Query 320 CCCTTTGTA 328 ||||||||| Sbjct 166038 CCCTTTGTA 166046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947197736192