Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rosellinia_20necatrix_20[genbank_20GCA_5F001445595.3_202017-02-01] 239 sequences; 44,257,831 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq13 284 1e-71 seq37 122 7e-23 >seq13 Length=863668 Score = 284 bits (314), Expect = 1e-71 Identities = 633/942 (67%), Gaps = 6/942 (1%) Strand=Plus/Minus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||| | |||||| |||||||| ||||| | || || || || | |||||||| Sbjct 288418 GGCAGGGCCATAGATGCTAGGTTGCAAACAGCAACTTCATCTGGGGCTGAATACTCGATG 288359 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 || |||||||| ||||| || ||| || ||||| ||||||| || || ||||||||| Sbjct 288358 ATCTCGGTGCAGAGATTGGAGCTGCGGATTGTGCCTAAATTCTTCTGGTTGCTCTTGCGA 288299 Query 66122 TTG-CATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGAT 66180 ||| |||| ||||||||| | |||| | || ||||||| || || | || | ||| Sbjct 288298 TTGGCATG-ATCCTTGTAGAGCATGAAGGGGTTGCCGGTTTCTGTCTGAGCTTCGAGGAT 288240 Query 66181 GGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCC-CTACCTTTGCGTTCGTAAT 66239 ||| | ||| || | ||||| | | | | | ||| | ||| | || || Sbjct 288239 GGCATACCAGAGCTTCTGAGCCTTTATCTTCTGG-CGGCCGCGACCCTCAGCCTCATACG 288181 Query 66240 GTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTG 66299 ||||||||| || || ||||| | || || | || | || |||| | | Sbjct 288180 TTTCGTAGAGAGCCTCAAACTCATCACCGTAGACATCAGCAAGGCCGGGGCACTCATTCG 288121 Query 66300 GACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCC 66359 | |||||||||| ||| || || | || ||| ||||| ||| || |||||||| |||| Sbjct 288120 GGCACATCAGCGTCCACTCGCCGTTCTTTTCGACACGCTTCATGAAGAGATCAGGGATCC 288061 Query 66360 AGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGT 66419 | ||||| ||||||| || || || || ||||| | || ||||| || |||| | Sbjct 288060 AAAGGGCCAAGAAGAGGTCACGAGCGCGAACTTCCTCCTTCCCATGATTCTTTCGCAGAT 288001 Query 66420 CGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATAC 66479 | ||||||||||| | || | ||||||||||| || ||||||||||| | ||| | Sbjct 288000 CTAGGAACTCAAACACATCCGAGTGCCATGGTTCAAGATAGATGGCGAAGGCGCCAGGCC 287941 Query 66480 GTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTA 66539 | ||| |||||||| |||||||| ||||| || ||||||||||||| ||| || | Sbjct 287940 GCTTGTTACCACCTTGATCGACGTAACGAGCCGTGTTATTGAAGACACGCAGCATGGGAA 287881 Query 66540 CGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCG 66598 | | ||||||||| | || || || || ||||| || || ||| || || || | Sbjct 287880 CAATACCGTTAGATGTACCGTTAGTTCCAGCGATGTAAGAGCC-CGTGGCACGGATGCGG 287822 Query 66599 TGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTC 66658 |||||||| || ||||| || || ||| |||| || || |||||| || || Sbjct 287821 TGAACATTGAGGCCAATGCCTCCAGCCATCTTTGAAATCATAGCACATGTCTTCAAGGTA 287762 Query 66659 CGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGG 66718 | || || || ||| || |||| ||| | | | | || || | ||| Sbjct 287761 TCATAAATTCCCTCGATGCTATCGTCCTTCATGTCGACTAAGAAACAAGACGACATCTGG 287702 Query 66719 GGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGAC 66778 |||| ||||| |||| |||||| || || | ||| || || ||| | | | ||| Sbjct 287701 GGTTGCGGTGTTCCGGCATTGAAGAGTGTCGGAGAAGCATGGGTGAAGAATTTAAGGGAC 287642 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACAT 66838 ||| ||||| ||||||| ||| || |||| || || || |||| || Sbjct 287641 ATGAGGTTGTAGGTCTCGAGGACCCTCTCGATGTCGTCTCCCCAGATGCCGACCGCCACG 287582 Query 66839 CGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAG 66898 ||||| | | || ||||| | || || | | | ||||| | | | |||||| Sbjct 287581 CGCATGATCATGTGCTGAGGTCTCTCAACAATCTTGCCGTTGATTTTGAGAAGGTAGGAC 287522 Query 66899 CGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCG 66940 || |||| ||||||| ||||| || ||| ||||||||| Sbjct 287521 CGCTCCAACGTCTTGAAGCCAAAATATTGGTAGTTGAAATCG 287480 Score = 113 bits (124), Expect = 4e-20 Identities = 312/469 (67%), Gaps = 16/469 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTC 65137 ||||| || || || || | | |||||| |||| || | || ||||||||||||||| Sbjct 289324 TCGACGGTAAATTGAATAGGTTGAGCAGCGGCCTGTGTTCGGAGGTAGTACATGCCGGTC 289265 Query 65138 TTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCTC 65196 || || || ||| || ||| ||||| || | ||||||| | | ||||| Sbjct 289264 TTCAGACCGAGTTTCCACCCAGCGAAGTGCATGCTTG-TGATTTTGCCCATGGTAGGCTC 289206 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || || ||||| | |||||| |||||| || | ||||||||| |||||||| Sbjct 289205 TCTCATGTGGATATTGAGAGACTGAGACTGATCAATAAATGCACCACGATCAGCAGCCAT 289146 Query 65257 GT---CAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCT 65312 | ||| | || | || |||||||||||||| ||||| || | | | |||| Sbjct 289145 TTGGACAACTGTGCGCTGG---GAAATCTCCCAGACGGTTTTGTATAGT-GCCTTGACCT 289090 Query 65313 CAATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCA 65372 || | || || ||| | ||||| ||||| |||||||| ||||| || Sbjct 289089 CAGTGGGTATACTAGGAATATTCTGGATGGAACCGTTTTCGGCAATAATACGATTCTTCA 289030 Query 65373 TCGACTCTGACCACAAACCCAAATCGATAAGATG-TTGA--ACCAAGTGACGATTGATGA 65429 | || ||||||| |||||||| | |||| |||| | | || || |||| || Sbjct 289029 TATTGTCAGACCACAGTCCCAAATCCACTAGATCCTTGAGTAGCCAGGGA---TTGACGA 288973 Query 65430 CTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGG 65489 | ||||||||||| | || || ||||| || ||||| || ||| ||||||||| Sbjct 288972 CCTGGAACTCGCCTGCCAAGACGCGACGAGAGTAAATGTTTGAAGTGTAAGGTTCAAAGC 288913 Query 65490 ATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGC 65538 | || |||| || | || || | || ||||||||||| ||||| Sbjct 288912 ACTCGTTGTTACCCAAGATCTGCGAGGTGCTAGCAGTTGGCATAGGAGC 288864 >seq37 Length=418716 Score = 122 bits (134), Expect = 7e-23 Identities = 231/334 (69%), Gaps = 7/334 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||| ||||| ||||| ||||||||||| | |||||| | || | Sbjct 50952 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCTGAGGAGATTGACCTC 51011 Query 61147 TCCAAAGACATGAATGACTGGGAG---CGTTT-ATCGAGCGGTGAACAACATTTCATTAA 61202 ||||| || ||| | |||||| | || | | ||| | ||| || |||| || Sbjct 51012 TCCAAGGATATGCACGACTGGAACAACCGAATCAATGAG-GATGAGAAATATTTTATCTC 51070 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 || | |||| ||||||||||| || || || || ||||| ||||| | |||| || Sbjct 51071 TCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAACCTTGTGGAGCG 51130 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 ||| ||||| || | | ||||| || || || |||||||||||||| || Sbjct 51131 TTTTAGTGGCGAGGTTCAGATCCCCGAGGCTCGGTGCTTTTACGGCTTCCAGATCATGAT 51190 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 |||||| | ||||| |||| ||| | |||| || || || ||||||| |||| || Sbjct 51191 GGAGAACATTCACTCTGAGACATACTCTCTTCTTATTGACACCTACATCAAAGAGCCCGC 51250 Query 61383 GGAACGTGAACGA-TTGTTCAATGCCATCGAGAC 61415 | || || | | | |||||||| || ||||| Sbjct 51251 TCAGCG-GACCTACCTCTTCAATGCTATTGAGAC 51283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397566841958960