Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq14 358 1e-96
seq4904 114 2e-23
seq6137 105 1e-20
>seq14
Length=13360
Score = 358 bits (396), Expect = 1e-96
Identities = 203/206 (99%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3690 TACTAAGCTGAATTACCATTGCGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 3631
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3630 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 3571
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3570 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 3511
Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||||||||||||||||||
Sbjct 3510 GAACGCTTGGCTGCCACAAGCCAGTT 3485
Score = 163 bits (180), Expect = 5e-38
Identities = 90/90 (100%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3085 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 3026
Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||
Sbjct 3025 ATAGGCCACACTTTCATGGTTTGTATTCAC 2996
>seq4904
Length=10839
Score = 114 bits (126), Expect = 2e-23
Identities = 74/81 (91%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||||||||||| || ||||||||||||||||||| |||| |||||||| ||
Sbjct 4238 AATTCTGCTTCGGTATGATGGGGAGAGCCGACATCGAAGGATAAAAATGCAACGTCATTA 4179
Query 180 TGAACGCTTGGCTGCCACAAG 200
||| |||||||||||||||||
Sbjct 4178 TGACCGCTTGGCTGCCACAAG 4158
>seq6137
Length=11582
Score = 105 bits (116), Expect = 1e-20
Identities = 76/88 (86%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
||||| ||| | |||||| |||| || ||| ||||||| |||||||||||||||||||
Sbjct 647 ATCCCCGTGTCAGCTTTTCCGGCATCTTAAGCTTCAAATTCCGAGGGACTAAAGGATCGA 706
Query 267 TAGGCCACACTTTCATGGTTTGTATTCA 294
||| |||||||||||||||| |||||||
Sbjct 707 TAGTCCACACTTTCATGGTTCGTATTCA 734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854337244320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |