Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq14 322 9e-86
>seq14
Length=13360
Score = 322 bits (356), Expect = 9e-86
Identities = 193/203 (95%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11813 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 11872
Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245
|||| |||| ||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 11873 CATCTCCTTAACCGAAAGGTTTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 11932
Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 11933 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGT 11992
Query 306 TGATTACGTCCCTGCCCTTTGTA 328
|||||||||||||||| ||||||
Sbjct 11993 TGATTACGTCCCTGCCTTTTGTA 12015
Score = 174 bits (192), Expect = 3e-41
Identities = 102/106 (96%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 11355 GAACGAGACCTTAACCTGCTAAATAGCCAGGCTAGCTTTGGCTGGTCGCCGGCTTCTTAG 11414
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11415 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 11460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947130428160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |