Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq14 280 2e-73
>seq14
Length=13360
Score = 280 bits (310), Expect = 2e-73
Identities = 234/280 (84%), Gaps = 5/280 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 3688 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 3745
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3746 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 3805
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179
||| | ||||||| || ||||||||||||||||||||||||| || ||||| |||
Sbjct 3806 GAAAGCGGTGATTTATACCCACACATCGTAGTCGGATACGAATAGGCCTATGGCCCTGAA 3865
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGC-GGGGCGCTCAGCTGGCGGATTG 238
|||||| || |||||| | || | |||| | | | | ||||| || |||
Sbjct 3866 TCTTAGCTGGTTGGCAAC-GATATCATGAGGAAAAACTTGTGGTATTAGCTGACGTCTTG 3924
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| |||||||| ||| ||||||||||||| |||||
Sbjct 3925 CAATTTTACCATGCGTGGGGTTAAATCCTTTGCATACGAC 3964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819141710080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |