Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12- 31] 7,345 sequences; 40,250,382 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq14 280 2e-73 >seq14 Length=13360 Score = 280 bits (310), Expect = 2e-73 Identities = 234/280 (84%), Gaps = 5/280 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||||| Sbjct 3688 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 3745 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 3746 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 3805 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179 ||| | ||||||| || ||||||||||||||||||||||||| || ||||| ||| Sbjct 3806 GAAAGCGGTGATTTATACCCACACATCGTAGTCGGATACGAATAGGCCTATGGCCCTGAA 3865 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGC-GGGGCGCTCAGCTGGCGGATTG 238 |||||| || |||||| | || | |||| | | | | ||||| || ||| Sbjct 3866 TCTTAGCTGGTTGGCAAC-GATATCATGAGGAAAAACTTGTGGTATTAGCTGACGTCTTG 3924 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| |||||||| ||| ||||||||||||| ||||| Sbjct 3925 CAATTTTACCATGCGTGGGGTTAAATCCTTTGCATACGAC 3964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819141710080