Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20echinophila_20[genbank_20GCA_5F000812885.1_202014-12-
31] 7,345 sequences; 40,250,382 total letters
Query= NC_032108.1
Length=589068
Score E
Sequences producing significant alignments: (Bits) Value
seq5182 86.0 2e-11
>seq5182
Length=15329
Score = 86.0 bits (94), Expect = 2e-11
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 12814 ACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA--AGTCTTGTTCCAAATGCCT 12871
|||||| || || |||| || ||| | ||| |||| | | || ||||||| ||
Sbjct 7016 ACCTAGCGTTTTGCCTCGAATTTCCCAGCA--CTTGTTACTAACTTTATTCCAAACACCA 6959
Query 12872 TGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTTGTCCTATG 12931
| ||| | ||| || || ||||||| ||||||| |||| || | || || |||
Sbjct 6958 TTGTGCAATTCATTCGATCGGTCTCCAAGTTGACGAGCAAGAACGATAATTTCACCGATG 6899
Query 12932 ATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAATGCCTAGT 12991
| |||||||||||||||| || ||| ||| || || || || || ||||| || ||
Sbjct 6898 ACTAGCTCTGCCACGCTTCGAGAGTTTGCAAATGGTGAGTTGAAAACCGCAATTCCATGT 6839
Query 12992 TTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAAGCATCC 13041
||| ||| || |||| || |||| ||||||||||| |||||
Sbjct 6838 CTGGCAGCGTATTCGAGATCGACTTGATTTGTGCCAATGCAGAAACATCC 6789
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1884709017464085
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |