Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq45 154 2e-35 >seq45 Length=15910 Score = 154 bits (170), Expect = 2e-35 Identities = 136/171 (80%), Gaps = 14/171 (8%) Strand=Plus/Minus Query 59 TCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGA 117 ||||||||||||| ||| |||||| || ||||| | ||| | |||| Sbjct 15910 TCCTCGTTGAAGAGCAATAATTGC-------------CAGCACGACAGAGTTTAACAAGA 15864 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 |||||| |||| |||| |||| ||| |||||||| | ||||||||||||||||| Sbjct 15863 TTACCCAAACCTTTCGGTTAAGGAGATGAACTCGTTGGCTCTGTCAGTGTAGCGCGCGTG 15804 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15803 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 15753 Score = 89.7 bits (98), Expect = 8e-16 Identities = 64/71 (90%), Gaps = 2/71 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||| |||||||||||| ||||||| ||| |||||||| |||||||||||| | ||| Sbjct 69 GTACAAAAGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGCA-TTC 12 Query 61 CTCGTTGAAGA 71 ||||||||||| Sbjct 11 CTCGTTGAAGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751914204555