Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq45 178 7e-43 seq794 105 4e-21 seq491 84.2 1e-14 >seq45 Length=15910 Score = 178 bits (196), Expect = 7e-43 Identities = 103/106 (97%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 14782 GAACCCAAAGACTTTGATTTCTCGTGAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 14723 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTG 106 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 14722 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTG 14677 >seq794 Length=388 Score = 105 bits (116), Expect = 4e-21 Identities = 71/78 (91%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct 312 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAA-AATAACATCGTCC 370 Query 61 GATCCCTAGTCGGCATAG 78 |||||||||||||||||| Sbjct 371 GATCCCTAGTCGGCATAG 388 >seq491 Length=10367 Score = 84.2 bits (92), Expect = 1e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 6 CAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATC 64 |||||||||||||||||||| ||||| ||||||||||||| ||||||||| ||||||| Sbjct 10011 CAAAGACTTTGATTTCTCGTGCGGTGCTGAGCGAGTCAAAAAGATAACATCACCCGATC 9953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278369262030