Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq45 178 7e-43
seq794 105 4e-21
seq491 84.2 1e-14
>seq45
Length=15910
Score = 178 bits (196), Expect = 7e-43
Identities = 103/106 (97%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 14782 GAACCCAAAGACTTTGATTTCTCGTGAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 14723
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTG 106
|||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 14722 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTG 14677
>seq794
Length=388
Score = 105 bits (116), Expect = 4e-21
Identities = 71/78 (91%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||
Sbjct 312 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAA-AATAACATCGTCC 370
Query 61 GATCCCTAGTCGGCATAG 78
||||||||||||||||||
Sbjct 371 GATCCCTAGTCGGCATAG 388
>seq491
Length=10367
Score = 84.2 bits (92), Expect = 1e-14
Identities = 54/59 (92%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 6 CAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATC 64
|||||||||||||||||||| ||||| ||||||||||||| ||||||||| |||||||
Sbjct 10011 CAAAGACTTTGATTTCTCGTGCGGTGCTGAGCGAGTCAAAAAGATAACATCACCCGATC 9953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278369262030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |