Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq45 210 4e-52
>seq45
Length=15910
Score = 210 bits (232), Expect = 4e-52
Identities = 116/116 (100%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5027 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 4968
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4967 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 4912
Score = 161 bits (178), Expect = 2e-37
Identities = 89/89 (100%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 207 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4512 ATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGA 4453
Query 267 TAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||
Sbjct 4452 TAGGCCACACTTTCATGGTTTGTATTCAC 4424
Score = 152 bits (168), Expect = 9e-35
Identities = 89/92 (97%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 5433 TACTAAGCTGAATTACCATTGCGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 5374
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||||||||||||||||
Sbjct 5373 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 5342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854299377312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |