Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq45 284 2e-74
>seq45
Length=15910
Score = 284 bits (314), Expect = 2e-74
Identities = 236/281 (84%), Gaps = 7/281 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||||||| |||||||
Sbjct 5431 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGACAAGGCAGT 5488
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 5489 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 5548
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGG-CTTCGGCCCCGAA 179
||| | ||||||| || ||||||||||||||||||||||||| || ||||| |||
Sbjct 5549 GAAAGCGGTGATTTATACCCACACATCGTAGTCGGATACGAATAGGCCTATGGCCCTGAA 5608
Query 180 CCTTAGCAGGCCGGCAACGGGCGTC--CCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATT 237
|||||| || |||||| | | || | | || | | || | | ||||| || ||
Sbjct 5609 TCTTAGCTGGTTGGCAAC-GCCATCATAAGGGAAAACTTGTGGTGGT-AGCTGACGTCTT 5666
Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| |||||||| ||| ||||||||||||| |||||
Sbjct 5667 GCAATTTTACCATGCGTGGGGTTAAATCCTTTGCATACGAC 5707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819106537728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |