Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31]
11,777 sequences; 51,994,176 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq45 603 3e-170
seq795 237 5e-60
>seq45
Length=15910
Score = 603 bits (668), Expect = 3e-170
Identities = 347/354 (98%), Gaps = 1/354 (0%)
Strand=Plus/Minus
Query 151 AATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAG 210
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 13078 AATTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAG 13019
Query 211 GGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATG 270
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 13018 GGCAGAAATTTGAATGAACCATCGCCGGCACAAGGCCATGCGATTCGTTAAGTTATTATG 12959
Query 271 AATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAA 330
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 12958 AATCACCAGGGAGCCCCGAAGGGCATTGGTTTTTTATCTAATAAATACACCCCTTCCGAA 12899
Query 331 GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA 390
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12898 GTCGAGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA 12839
Query 391 CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCT 450
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct 12838 CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTATAG-TTGCT 12780
Query 451 TATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 12779 TATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 12726
Score = 259 bits (286), Expect = 1e-66
Identities = 148/151 (98%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 13596 GTACTCATTCCAATTACAAGACTCGAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 13537
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13536 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 13477
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTA 151
|||||||||||||||||||||| ||||||||
Sbjct 13476 TCTCAGGCTCCCTCTCCGGAATAGAACCCTA 13446
>seq795
Length=494
Score = 237 bits (262), Expect = 5e-60
Identities = 137/141 (97%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 354 GTTCTCATTCCAATTACGAGACCCAAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 413
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 414 CCCCGTATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 473
Query 121 TCTCAGGCTCCCTCTCCGGAA 141
|||||||||||||||||||||
Sbjct 474 TCTCAGGCTCCCTCTCCGGAA 494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510222120192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |