Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rutstroemia_20sydowiana_20[genbank_20GCA_5F000812895.1_202014-12-31] 11,777 sequences; 51,994,176 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq45 603 3e-170 seq795 237 5e-60 >seq45 Length=15910 Score = 603 bits (668), Expect = 3e-170 Identities = 347/354 (98%), Gaps = 1/354 (0%) Strand=Plus/Minus Query 151 AATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAG 210 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 13078 AATTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAG 13019 Query 211 GGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATG 270 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 13018 GGCAGAAATTTGAATGAACCATCGCCGGCACAAGGCCATGCGATTCGTTAAGTTATTATG 12959 Query 271 AATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAA 330 |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 12958 AATCACCAGGGAGCCCCGAAGGGCATTGGTTTTTTATCTAATAAATACACCCCTTCCGAA 12899 Query 331 GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA 390 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12898 GTCGAGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA 12839 Query 391 CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCT 450 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 12838 CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTATAG-TTGCT 12780 Query 451 TATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 12779 TATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 12726 Score = 259 bits (286), Expect = 1e-66 Identities = 148/151 (98%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 13596 GTACTCATTCCAATTACAAGACTCGAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 13537 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13536 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 13477 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTA 151 |||||||||||||||||||||| |||||||| Sbjct 13476 TCTCAGGCTCCCTCTCCGGAATAGAACCCTA 13446 >seq795 Length=494 Score = 237 bits (262), Expect = 5e-60 Identities = 137/141 (97%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct 354 GTTCTCATTCCAATTACGAGACCCAAAAGAGCCCCGTATCAGTATTTATTGTCACTACCT 413 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 414 CCCCGTATCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 473 Query 121 TCTCAGGCTCCCTCTCCGGAA 141 ||||||||||||||||||||| Sbjct 474 TCTCAGGCTCCCTCTCCGGAA 494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510222120192