Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01]
5,856 sequences; 32,778,109 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq5200 262 6e-68
seq1000 221 2e-55
seq3439 217 2e-54
seq5644 154 2e-35
seq4559 154 2e-35
seq998 154 2e-35
seq359 154 2e-35
>seq5200
Length=439
Score = 262 bits (290), Expect = 6e-68
Identities = 198/229 (86%), Gaps = 8/229 (3%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 163 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 220
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | | ||||||
Sbjct 221 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 280
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| |||||||||| ||||| ||| | |||||||||||||||||||
Sbjct 281 ACCCGGGCCTTTCGGCCAAGGA-----ACTCGCTGACCCCGTCAGTGTAGCGCGCGTGCG 335
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 336 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 384
>seq1000
Length=361
Score = 221 bits (244), Expect = 2e-55
Identities = 175/206 (85%), Gaps = 8/206 (4%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 163 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 220
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | | ||||||
Sbjct 221 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 280
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| |||||||||| ||||| ||| | |||||||||||||||||||
Sbjct 281 ACCCGGGCCTTTCGGCCAAGGA-----ACTCGCTGACCCCGTCAGTGTAGCGCGCGTGCG 335
Query 180 GCCCAGAACATCTAAGGGCATCACAG 205
||||||||||||||||||||||||||
Sbjct 336 GCCCAGAACATCTAAGGGCATCACAG 361
>seq3439
Length=361
Score = 217 bits (240), Expect = 2e-54
Identities = 174/206 (84%), Gaps = 8/206 (4%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 199 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 142
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | | ||||||
Sbjct 141 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 82
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| ||| |||||||||| ||||| || | |||||||||||||||||||
Sbjct 81 ACCCGGGCCTTTCGGCCAAGGA-----ACTCGCTGCCCCCGTCAGTGTAGCGCGCGTGCG 27
Query 180 GCCCAGAACATCTAAGGGCATCACAG 205
||||||||||||||||||||||||||
Sbjct 26 GCCCAGAACATCTAAGGGCATCACAG 1
>seq5644
Length=632
Score = 154 bits (170), Expect = 2e-35
Identities = 121/141 (86%), Gaps = 3/141 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 148 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 91
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | | ||||||
Sbjct 90 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 31
Query 120 ACCCGGACCTGTCGGCCAAGG 140
|||||| ||| ||||||||||
Sbjct 30 ACCCGGGCCTTTCGGCCAAGG 10
>seq4559
Length=632
Score = 154 bits (170), Expect = 2e-35
Identities = 121/141 (86%), Gaps = 3/141 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 148 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 91
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | | ||||||
Sbjct 90 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 31
Query 120 ACCCGGACCTGTCGGCCAAGG 140
|||||| ||| ||||||||||
Sbjct 30 ACCCGGGCCTTTCGGCCAAGG 10
>seq998
Length=632
Score = 154 bits (170), Expect = 2e-35
Identities = 121/141 (86%), Gaps = 3/141 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 485 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 542
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | | ||||||
Sbjct 543 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 602
Query 120 ACCCGGACCTGTCGGCCAAGG 140
|||||| ||| ||||||||||
Sbjct 603 ACCCGGGCCTTTCGGCCAAGG 623
>seq359
Length=310
Score = 154 bits (170), Expect = 2e-35
Identities = 121/141 (86%), Gaps = 3/141 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| |
Sbjct 148 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 91
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | | | ||||||
Sbjct 90 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 31
Query 120 ACCCGGACCTGTCGGCCAAGG 140
|||||| ||| ||||||||||
Sbjct 30 ACCCGGGCCTTTCGGCCAAGG 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751957339040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |