Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq5200 262 6e-68 seq1000 221 2e-55 seq3439 217 2e-54 seq5644 154 2e-35 seq4559 154 2e-35 seq998 154 2e-35 seq359 154 2e-35 >seq5200 Length=439 Score = 262 bits (290), Expect = 6e-68 Identities = 198/229 (86%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 163 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 220 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | | |||||| Sbjct 221 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 280 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| |||||||||| ||||| ||| | ||||||||||||||||||| Sbjct 281 ACCCGGGCCTTTCGGCCAAGGA-----ACTCGCTGACCCCGTCAGTGTAGCGCGCGTGCG 335 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 336 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 384 >seq1000 Length=361 Score = 221 bits (244), Expect = 2e-55 Identities = 175/206 (85%), Gaps = 8/206 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 163 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 220 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | | |||||| Sbjct 221 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 280 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| |||||||||| ||||| ||| | ||||||||||||||||||| Sbjct 281 ACCCGGGCCTTTCGGCCAAGGA-----ACTCGCTGACCCCGTCAGTGTAGCGCGCGTGCG 335 Query 180 GCCCAGAACATCTAAGGGCATCACAG 205 |||||||||||||||||||||||||| Sbjct 336 GCCCAGAACATCTAAGGGCATCACAG 361 >seq3439 Length=361 Score = 217 bits (240), Expect = 2e-54 Identities = 174/206 (84%), Gaps = 8/206 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 199 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 142 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | | |||||| Sbjct 141 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 82 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| |||||||||| ||||| || | ||||||||||||||||||| Sbjct 81 ACCCGGGCCTTTCGGCCAAGGA-----ACTCGCTGCCCCCGTCAGTGTAGCGCGCGTGCG 27 Query 180 GCCCAGAACATCTAAGGGCATCACAG 205 |||||||||||||||||||||||||| Sbjct 26 GCCCAGAACATCTAAGGGCATCACAG 1 >seq5644 Length=632 Score = 154 bits (170), Expect = 2e-35 Identities = 121/141 (86%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 148 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 91 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | | |||||| Sbjct 90 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 31 Query 120 ACCCGGACCTGTCGGCCAAGG 140 |||||| ||| |||||||||| Sbjct 30 ACCCGGGCCTTTCGGCCAAGG 10 >seq4559 Length=632 Score = 154 bits (170), Expect = 2e-35 Identities = 121/141 (86%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 148 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 91 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | | |||||| Sbjct 90 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 31 Query 120 ACCCGGACCTGTCGGCCAAGG 140 |||||| ||| |||||||||| Sbjct 30 ACCCGGGCCTTTCGGCCAAGG 10 >seq998 Length=632 Score = 154 bits (170), Expect = 2e-35 Identities = 121/141 (86%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 485 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 542 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | | |||||| Sbjct 543 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 602 Query 120 ACCCGGACCTGTCGGCCAAGG 140 |||||| ||| |||||||||| Sbjct 603 ACCCGGGCCTTTCGGCCAAGG 623 >seq359 Length=310 Score = 154 bits (170), Expect = 2e-35 Identities = 121/141 (86%), Gaps = 3/141 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 148 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGGATT-C 91 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | | | |||||| Sbjct 90 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACGGGGGCTAACAAGATT 31 Query 120 ACCCGGACCTGTCGGCCAAGG 140 |||||| ||| |||||||||| Sbjct 30 ACCCGGGCCTTTCGGCCAAGG 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751957339040