Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01]
5,856 sequences; 32,778,109 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq3561 437 2e-120
>seq3561
Length=1416
Score = 437 bits (484), Expect = 2e-120
Identities = 286/314 (91%), Gaps = 1/314 (0%)
Strand=Plus/Minus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|||||||||||||||||||| |||| ||| || ||| |||||||||||| ||| ||||||
Sbjct 752 TGGTCCGGCCGGGCCTTTCCCTCTGTGGAACCCCATACCCTTCACTGGGCGTGGCGGGGA 693
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
|||||| ||||||||||||||||||||||| || | |||||||| |||||||||||||
Sbjct 692 AACAGGACATTTACTTTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 633
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGT 184
||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 632 TAGCATGGAATAATAAAATAGGACGCGCGGTTCTATTTTGTTGGTTTATAGGACCGCCGT 573
Query 185 AATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGG 244
||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 572 AATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAACTGTCAGAGGTGAAATTCTTGG 513
Query 245 ATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGA 304
|| |||||||||||||||||||||||| || ||||||||||||||||||||||| ||
Sbjct 512 ATCAGTTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAG-GA 454
Query 305 ACGAAAGTTAGGGG 318
||||||||||||||
Sbjct 453 ACGAAAGTTAGGGG 440
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915146405888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |