Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01]
5,856 sequences; 32,778,109 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq1912 136 1e-29
>seq1912
Length=26273
Score = 136 bits (150), Expect = 1e-29
Identities = 200/277 (72%), Gaps = 12/277 (4%)
Strand=Plus/Minus
Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70
||| |||| |||||| ||| ||||||||||||||| | |||||||| ||||
Sbjct 8249 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 8190
Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130
|||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| |
Sbjct 8189 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 8130
Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG--CGT----TAGCTA 184
| |||| ||||||| || ||||||| ||| |||| | || | || || |||
Sbjct 8129 CA-CGTTAAGGCCGCCTTTAACCGGGGGTTCCGTCAACA--TTAGATAGTAGAATACCTA 8073
Query 185 ACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA-CTTTCG 243
|| |||||| |||||||||||||| |||||| ||||| | | |||
Sbjct 8072 GTTGTCTCTGTTAACCAGCCGGCACCGGGCAGATCTCACACTTTATACTTAGATTTTTAA 8013
Query 244 TGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| ||| ||| ||||||||||||| | ||||||||||
Sbjct 8012 TCTTTCAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 7976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260726167552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |