Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= AAMG01001265.1 Length=174 Score E Sequences producing significant alignments: (Bits) Value seq2450 141 9e-32 >seq2450 Length=304 Score = 141 bits (156), Expect = 9e-32 Identities = 135/173 (78%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 2 CGAACACAAGATGCTCTACAGCTTGCAAGGTGAAGTCCCGGAAGAGCTGTACACCGTGCC 61 ||| ||||| ||||||| || |||| || | || || |||||||| |||||| | || Sbjct 208 CGAGCACAAACTGCTCTATGGCCTGCAGGGCGCGGTGCCCGAAGAGCTCTACACCATCCC 149 Query 62 CTTCGGCGAAGCCAACTTTGTGCGCGAAGGCCAGGACGTGACCCTGGTGACCTACGGGCG 121 |||||||| |||||||| ||||||| ||| ||||||||||||||||| ||||||| || Sbjct 148 GTTCGGCGAGGCCAACTTCCTGCGCGACGGCAAGGACGTGACCCTGGTGTCCTACGGCCG 89 Query 122 CATGGTGCACATCGCCCTGGAAGCCGCCGCCAACCTGGCGCGCCAGGGTATCG 174 |||||| ||| |||| |||| || || || |||||| | | ||||||| Sbjct 88 CATGGTCAACACCGCCATGGACGCGGCGCGCAGCCTGGCCGGGCGCGGTATCG 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457574040352