Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= AAMG01001286.1 Length=411 Score E Sequences producing significant alignments: (Bits) Value seq1901 410 3e-112 >seq1901 Length=441 Score = 410 bits (454), Expect = 3e-112 Identities = 301/350 (86%), Gaps = 0/350 (0%) Strand=Plus/Minus Query 1 CGAGGAACGGCCCGTCATAGCCGTGGCAGAACTGCAGGACGTGGCGATCAGCCGAGCGTG 60 ||||||||||||||||||| ||||||||||||||||| || || || ||||||||||| | Sbjct 351 CGAGGAACGGCCCGTCATAACCGTGGCAGAACTGCAGCACATGTCGCTCAGCCGAGCGAG 292 Query 61 TCATAAGGGTCCACGCCGTCCTTGACCACCAGGATGTCTTCCATGATCAGGTATTGCAGG 120 ||||||| |||||||||||| ||||||||||| || |||||||||||||| ||||||| Sbjct 291 TCATAAGCGTCCACGCCGTCGTTGACCACCAGATTGGCTTCCATGATCAGGGATTGCAGA 232 Query 121 TCGGAGCCAAAGAACATGTCCAGCGCGTCTTTCGGCGAGCAGATCATCGCTTCGCCACGG 180 | |||||| ||||||||| ||||||| || ||||||||||||||| | |||||| ||| Sbjct 231 GCTGAGCCATAGAACATGTTCAGCGCGGCTGGCGGCGAGCAGATCATTGGTTCGCCGCGG 172 Query 181 CGGTTGAGCGAGGTGTTCAGGGACACGCCGTTGCCGGTCAGCACTTCCAGCTCTTTCATC 240 |||||||||||||| |||||||| ||||| ||||| ||||| |||||||| | |||||| Sbjct 171 CGGTTGAGCGAGGTATTCAGGGATACGCCATTGCCCGTCAGGACTTCCAGGGCCTTCATC 112 Query 241 ATGTCGTAGTAGCGCGGGTTGTATTCGCGCTTGAGCACCTGGGCGCGGGAGGTGCCATCT 300 ||||||||||||||||| || |||||||||||||||||||||| ||||| || || | Sbjct 111 ATGTCGTAGTAGCGCGGAATGAATTCGCGCTTGAGCACCTGGGCCCGGGAAGTACCGGCC 52 Query 301 TCATGGACCACTTCCGGCACGCGGGTCTTCCACTCTTCCGACACTTCAAA 350 |||| ||| |||||||| | |||||| |||||||||| | |||||| || Sbjct 51 TCATTGACGACTTCCGGTATGCGGGTTGTCCACTCTTCGGCCACTTCGAA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1212728978432