Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01]
5,856 sequences; 32,778,109 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq5644 100 2e-19
seq5200 100 2e-19
seq4559 100 2e-19
seq3439 100 2e-19
seq1000 100 2e-19
seq998 100 2e-19
seq359 100 2e-19
>seq5644
Length=632
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 197 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 141
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 140 GGCAGGGACGTAAT-CAACGCAAGCT 116
>seq5200
Length=439
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 114 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 170
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 171 GGCAGGGACGTAAT-CAACGCAAGCT 195
>seq4559
Length=632
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 197 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 141
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 140 GGCAGGGACGTAAT-CAACGCAAGCT 116
>seq3439
Length=361
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 248 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 192
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 191 GGCAGGGACGTAAT-CAACGCAAGCT 167
>seq1000
Length=361
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 114 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 170
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 171 GGCAGGGACGTAAT-CAACGCAAGCT 195
>seq998
Length=632
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 436 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 492
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 493 GGCAGGGACGTAAT-CAACGCAAGCT 517
>seq359
Length=310
Score = 100 bits (110), Expect = 2e-19
Identities = 77/86 (90%), Gaps = 4/86 (5%)
Strand=Plus/Minus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||| ||||||| || ||||||||| ||||||||||| ||||||||||
Sbjct 197 TCCGAACGC-CTCACTGAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 141
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
|||||||||||||| |||||||||||
Sbjct 140 GGCAGGGACGTAAT-CAACGCAAGCT 116
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300783486080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |