Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= AAMG01001445.1 Length=285 Score E Sequences producing significant alignments: (Bits) Value seq4974 159 6e-37 >seq4974 Length=330 Score = 159 bits (176), Expect = 6e-37 Identities = 200/279 (72%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 13 CTCGCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAGGTGGGCGAGGAGCAGAT 72 ||| ||| | | || ||||| |||||| |||||||||||||||| ||| | |||||||| Sbjct 16 CTCCCGCCCGCCCGCCCCGCTGGATCGGTTGGTGCTGGTGCAGGTCGGCAACGAGCAGAT 75 Query 73 CCTGCTCGGCATCACCCCCGGCCGCATCACCCCGCTGCATGTACTCAAGACCCCGGTGGA 132 |||||| ||| | | || ||| |||||| || ||||||| |||||| |||||| | Sbjct 76 CCTGCTGGGCCTGAGTCCAGGCACCATCACTGCGTTGCATGTCCTCAAGGAGCCGGTGCA 135 Query 133 CGCGGTCAAGACCGAAGCCGCCACGCNNNNNNNNNNNNAGCGCCTGATGGAGTTGCTGGG 192 | | || ||||| || || | ||||||| ||||| ||||||| Sbjct 136 GGTGCCCACCACCGACCAGGCTACTCCCGAGTTTGCCCAGCGCCTCATGGAACTGCTGGG 195 Query 193 CAAGGATCAAAAGGATAAGAAGTAA------TGCGCGTTTTGTTGACGCTCATGCTGTTG 246 || || || ||||||||||||||| ||||| || ||||| || | ||| || Sbjct 196 TAAAGACCAGAAGGATAAGAAGTAATGCCGTTGCGCATTCTGTTGGCGTTGGCCCTGATG 255 Query 247 CTGGCCGCACCGATGGCCCTGGGCGCCGACCCGTTGTCG 285 |||||||||||| |||| | | |||||| ||||||||| Sbjct 256 CTGGCCGCACCGTTGGCGTTCGCCGCCGATCCGTTGTCG 294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 812753889856