Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01]
5,856 sequences; 32,778,109 total letters
Query= AAMG01001445.1
Length=285
Score E
Sequences producing significant alignments: (Bits) Value
seq4974 159 6e-37
>seq4974
Length=330
Score = 159 bits (176), Expect = 6e-37
Identities = 200/279 (72%), Gaps = 6/279 (2%)
Strand=Plus/Plus
Query 13 CTCGCGCGCCCTCGGCCCGCGTGATCGGCTGGTGCTGGTGCAGGTGGGCGAGGAGCAGAT 72
||| ||| | | || ||||| |||||| |||||||||||||||| ||| | ||||||||
Sbjct 16 CTCCCGCCCGCCCGCCCCGCTGGATCGGTTGGTGCTGGTGCAGGTCGGCAACGAGCAGAT 75
Query 73 CCTGCTCGGCATCACCCCCGGCCGCATCACCCCGCTGCATGTACTCAAGACCCCGGTGGA 132
|||||| ||| | | || ||| |||||| || ||||||| |||||| |||||| |
Sbjct 76 CCTGCTGGGCCTGAGTCCAGGCACCATCACTGCGTTGCATGTCCTCAAGGAGCCGGTGCA 135
Query 133 CGCGGTCAAGACCGAAGCCGCCACGCNNNNNNNNNNNNAGCGCCTGATGGAGTTGCTGGG 192
| | || ||||| || || | ||||||| ||||| |||||||
Sbjct 136 GGTGCCCACCACCGACCAGGCTACTCCCGAGTTTGCCCAGCGCCTCATGGAACTGCTGGG 195
Query 193 CAAGGATCAAAAGGATAAGAAGTAA------TGCGCGTTTTGTTGACGCTCATGCTGTTG 246
|| || || ||||||||||||||| ||||| || ||||| || | ||| ||
Sbjct 196 TAAAGACCAGAAGGATAAGAAGTAATGCCGTTGCGCATTCTGTTGGCGTTGGCCCTGATG 255
Query 247 CTGGCCGCACCGATGGCCCTGGGCGCCGACCCGTTGTCG 285
|||||||||||| |||| | | |||||| |||||||||
Sbjct 256 CTGGCCGCACCGTTGGCGTTCGCCGCCGATCCGTTGTCG 294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 812753889856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |