Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= AAMG01001589.1 Length=431 Score E Sequences producing significant alignments: (Bits) Value seq4448 212 2e-52 >seq4448 Length=377 Score = 212 bits (234), Expect = 2e-52 Identities = 237/317 (75%), Gaps = 0/317 (0%) Strand=Plus/Minus Query 106 CAGCTGATGCGCCTTGGGCTGCGGATTTTCCTGGTGTATGCGCTGTTTATCGGCCTGACC 165 ||| |||||| | ||| | || || || ||||| |||| |||||| | |||||||||| Sbjct 317 CAGTTGATGCCGGTGGGGATCCGTATCTTACTGGTCTATGGGCTGTTCAGCGGCCTGACC 258 Query 166 GGCTACTTCGTGCTCAACACCGTGATGAAGGAAATCCGCCCCGGCGTGCGCCAATCCACC 225 || | ||||||| || |||| || | ||||| ||||||||||| || |||||| Sbjct 257 GGGGATGTCGTGCTGGGAACGTTGATCGAGCAGATCCGTCCCGGCGTGCGTCAGTCCACC 198 Query 226 GAAGAAACATTGGTGGACACCGCCAACCTGCTGGCTGAAATCCTGCGTGCAGACGTTAAA 285 || ||||| |||||||||| ||||||||| |||| || |||||||| | || | || Sbjct 197 GAGGAAACCCTGGTGGACACGGCCAACCTGATGGCCGAGATCCTGCGGGACGATTTCAAG 138 Query 286 AACGGCACCCTCGGCCAGAGCCATTGGCCCGAATTGCTCAAGGCTTATGGCAGTCGCCAG 345 ||| |||||| ||||| | ||||| | |||||||||| || ||| || ||| Sbjct 137 GCCGGGACCCTCAACCAGAATCGCTGGCCACAGCTGCTCAAGGCCTACGGCGAGCGTCAG 78 Query 346 CCGGGAGCGACGATCTGGGGCCTGCCGAAAAACCAGGTCAACCATCGCATCTACGTGACC 405 |||| |||||||||||||||||||||| ||||| || ||||||||||| ||| || Sbjct 77 CCGGCGGCGACGATCTGGGGCCTGCCGACGGGCCAGGGCAGCCATCGCATCTGCGTCACG 18 Query 406 GACGCCAAGGGCAGGGT 422 || || |||||| || Sbjct 17 GATCGCAGGGGCAGCGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1276725230592