Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01]
5,856 sequences; 32,778,109 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq3561 140 4e-31
>seq3561
Length=1416
Score = 140 bits (154), Expect = 4e-31
Identities = 149/193 (77%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||| ||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||
Sbjct 582 CTATAAACCAACAAAATAGAACCGCGCGTCCTATTTTATTATTCCATGCTAATGTATTCG 641
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||| | || |||||||||||| |||| ||||| |||||| |||| | ||
Sbjct 642 AGCATAGGCCTGCCTGGAGCACTCTAATTTTTTCAAAGTAAATGTCCTGTTTCCCCGCCA 701
Query 126 C-ACCAATGAAGGCATACGGGCT--CACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGC 182
| ||| |||||| || ||| | ||| || | ||| | || |||| | |||
Sbjct 702 CGCCCAGTGAAGG-GTATGGGGTTCCACAGAGGGAAAGGCCCGGCCGGACCAGTGCACGC 760
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 761 GGTGAGGCGGACC 773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595166234304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |