Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5200 367 2e-99 seq3439 271 1e-70 seq1000 271 1e-70 seq5644 196 9e-48 seq4559 196 9e-48 seq998 196 9e-48 seq359 196 9e-48 seq3561 127 4e-27 >seq5200 Length=439 Score = 367 bits (406), Expect = 2e-99 Identities = 239/263 (91%), Gaps = 5/263 (2%) Strand=Plus/Minus Query 66 CGCCGGCTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGT 125 ||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 421 CGCTGGCTTCTTAGAGGGACTTTCGGCTCAAGCCGAAGGAAGTTTGAGGCAATAACAGGT 362 Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||||||||||||||||| | | || |||||| Sbjct 361 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGGGGTCAGCGAGTT 302 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 | |||||||| |||| | |||||||||||||| | | |||||||||||||||||| Sbjct 301 C-----CTTGGCCGAAAGGCCCGGGTAATCTTGTTAGCCCCCGTCGTGCTGGGGATAGAG 247 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| Sbjct 246 CATTGCAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGT 187 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||| Sbjct 186 TGATTACGTCCCTGCCCTTTGTA 164 >seq3439 Length=361 Score = 271 bits (300), Expect = 1e-70 Identities = 182/203 (90%), Gaps = 5/203 (2%) Strand=Plus/Plus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||||||||||||||||| | | || |||||| Sbjct 1 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGGGGGCAGCGAGTT 60 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 | |||||||| |||| | |||||||||||||| | | |||||||||||||||||| Sbjct 61 C-----CTTGGCCGAAAGGCCCGGGTAATCTTGTTAGCCCCCGTCGTGCTGGGGATAGAG 115 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| Sbjct 116 CATTGCAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGT 175 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||| Sbjct 176 TGATTACGTCCCTGCCCTTTGTA 198 >seq1000 Length=361 Score = 271 bits (300), Expect = 1e-70 Identities = 182/203 (90%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 126 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT 185 |||||||||||||||||||||||||||||||||||||||||||||| | | || |||||| Sbjct 361 CTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACGGGGTCAGCGAGTT 302 Query 186 CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAG 245 | |||||||| |||| | |||||||||||||| | | |||||||||||||||||| Sbjct 301 C-----CTTGGCCGAAAGGCCCGGGTAATCTTGTTAGCCCCCGTCGTGCTGGGGATAGAG 247 Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305 |||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||| Sbjct 246 CATTGCAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGT 187 Query 306 TGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||| Sbjct 186 TGATTACGTCCCTGCCCTTTGTA 164 >seq5644 Length=632 Score = 196 bits (216), Expect = 9e-48 Identities = 126/138 (91%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| |||| | |||||||||||||| | | ||||||||||||||||||||||| Sbjct 10 CCTTGGCCGAAAGGCCCGGGTAATCTTGTTAGCCCCCGTCGTGCTGGGGATAGAGCATTG 69 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 70 CAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 129 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 130 ACGTCCCTGCCCTTTGTA 147 >seq4559 Length=632 Score = 196 bits (216), Expect = 9e-48 Identities = 126/138 (91%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| |||| | |||||||||||||| | | ||||||||||||||||||||||| Sbjct 10 CCTTGGCCGAAAGGCCCGGGTAATCTTGTTAGCCCCCGTCGTGCTGGGGATAGAGCATTG 69 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 70 CAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 129 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 130 ACGTCCCTGCCCTTTGTA 147 >seq998 Length=632 Score = 196 bits (216), Expect = 9e-48 Identities = 126/138 (91%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| |||| | |||||||||||||| | | ||||||||||||||||||||||| Sbjct 623 CCTTGGCCGAAAGGCCCGGGTAATCTTGTTAGCCCCCGTCGTGCTGGGGATAGAGCATTG 564 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 563 CAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 504 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 503 ACGTCCCTGCCCTTTGTA 486 >seq359 Length=310 Score = 196 bits (216), Expect = 9e-48 Identities = 126/138 (91%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||||||||| |||| | |||||||||||||| | | ||||||||||||||||||||||| Sbjct 10 CCTTGGCCGAAAGGCCCGGGTAATCTTGTTAGCCCCCGTCGTGCTGGGGATAGAGCATTG 69 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||| Sbjct 70 CAATTATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATT 129 Query 311 ACGTCCCTGCCCTTTGTA 328 |||||||||||||||||| Sbjct 130 ACGTCCCTGCCCTTTGTA 147 >seq3561 Length=1416 Score = 127 bits (140), Expect = 4e-27 Identities = 91/105 (87%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | ||| ||| | ||| |||||||||| Sbjct 105 GAACGAGACCTTAACCTGCTAAATAGCCCGCATTGCTCCGGCAGTGCGCTGGCTTCTTAG 46 Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGG 124 ||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 45 AGGGACTTTCGGCTCAAGCCGAAGGAAGTTTGAGGCAATAACAGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947144531968