Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq3618 342 4e-89 >seq3618 Length=19201 Score = 342 bits (378), Expect = 4e-89 Identities = 1215/1878 (65%), Gaps = 48/1878 (3%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || |||||||| |||| | ||||| |||| || | || ||||||||||| || Sbjct 721 ATCAACAGTGAACTGAATCGGAGCGGCAGCAGCCTGCGTGCGCAGGTAGTACATGCCAGT 780 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAAT-TCGGCT 65195 |||||| ||| ||| | ||||||||| | || | || |||| | | || | Sbjct 781 CTTGAGTCCAAGCTTCCATCCTGTGAAATGCAT-GCTGGTGATCTTGCCCATGCTGGGGT 839 Query 65196 CGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCA 65255 | || || || || | ||||||| ||| |||||| || |||||| ||||| |||| Sbjct 840 CCTTCATGTGGATGTTGAGCGACTGAGACTGGTCGATGAAAGCACCACGGTCTGCCGCCA 899 Query 65256 TGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGT-ACCTCA 65314 | | | || | || || |||||||| || |||||||||||| | | | || || Sbjct 900 TCTGCACAATTTGGCGCTGAGAGATCTCCCAAACAGTCTTGTACAGG-GCCTTGACATCG 958 Query 65315 ATTGGAATCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAATGCGATTACGCATC 65374 || || | |||| ||||| || || ||||| ||||| || ||| Sbjct 959 TCAGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTTTTCATA 1018 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 | |||||||| | ||| | || | ||||| | | || | |||| || ||| Sbjct 1019 GCATCTGACCAAAGACCAAGTTCAACAAGATCCTTCAGCAGCCATGGGTTGACAACCTGG 1078 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 |||||||| | || ||||| || |||||||| || || ||| |||||| | || Sbjct 1079 AACTCGCCAGCAAGCACACGGCGCTGGTAGATGTTCGAAGTATAGGGCTCAAAGCACTCG 1138 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 ||||||| ||||| || | ||| ||||| |||||||| || | || || ||| Sbjct 1139 TTGTTGCCAAGAATCTGTGATGTACTGGCAGTGGGCATGGGGGCAAGCAGCAGACTGTTG 1198 Query 65555 CGCAATCCGT--TCATTTCAATGTTG--TGACGCAATTCGTCCCAGTTCCACATCGGTTT 65610 || | || | || || || | ||| || |||||||| ||||| ||| Sbjct 1199 CGAATGCCATGCTCCTTGATTTGCTCCTTGAGGCT----GTCCCAGTCCCACA--GGTCG 1252 Query 65611 ATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACC 65670 | | | | ||| ||||||||| | |||||| | || ||| || ||||| Sbjct 1253 CTGGGC----TTGACGTTCCACATATCGTATTGCAGAATACCTTCGGAGGCAGGGGAACC 1308 Query 65671 GAGGAA--ACTATCGTACACTCCCTCCTCCTTGGCAAGTTGA-CAGCTGGTCTCGAGTGC 65727 ||| || | ||| ||||| ||||||| | | | ||| || | | || Sbjct 1309 CTTGAACGACGA--GTATGGGCCCTCAACCTTGGCGATCTCAACAGATGCAGTTAAA-GC 1365 Query 65728 GGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTA 65787 || ||||| ||||| || || | || || ||||| |||||| |||| | Sbjct 1366 AGCGTGGTAAATAGTCTCAAAGATCTGCTTGTTGAGCTCACGAGCCTCAGGCGACTCGAA 1425 Query 65788 CGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACG 65847 |||| | || | || | ||| || || |||||||| || | ||||||||| || Sbjct 1426 AGGCAATCGCAGAGCAAGGAAGGCGTCAGCGAGGCCTTGAACACCGACACCGATGGGCCG 1485 Query 65848 ATGACGCAAATTGGA---ACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAAT 65904 ||||||| ||| |||| |||||||| ||||| |||| || | ||||||||| Sbjct 1486 GTGACGCATGTTGCTGTTACGT---GCCTCAGGGACAGGATAGTGGTTTACATCGATAAT 1542 Query 65905 GCGATTCAAATTGCGTGTCACCACATGCACGA-TACGTCGCAATTGTTCGAAATCAAAAT 65963 || | |||||| ||| || || | | ||| ||| | | ||| || || Sbjct 1543 CTTGTTGAGATTGCGAACCACAACTTGGGTAACTTCGT-GCAGCTTCTTGAAGTCGAAGC 1601 Query 65964 GTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGT 66023 | | | |||| || | ||| | || || ||||| || |||| Sbjct 1602 AT---GCATCATCGTAGTTG---------ATAAAGGCAGACAGAGCCAGAGAAGCAAGGT 1649 Query 66024 TGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGC 66083 |||| ||||| | |||||||||||| | |||||||| || || ||||| || || || Sbjct 1650 TGCAAACAGCAACCTCGTCAGGAGCAGAATACTCGATGATCTCAGTGCAAAGGTTGGAGC 1709 Query 66084 AGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCA 66143 ||| || || || | |||| || || ||||| || ||||| || |||||||| | || Sbjct 1710 TGCGGATTGTACCAAGGTTCTTCTGGTTGCTCTTACGGTTGCAAGCGTCCTTGTAGAGCA 1769 Query 66144 TGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCT 66203 || | ||| | || |||||| || | ||||| ||| | || |||||| | |||| Sbjct 1770 TGAATGGATTACCAGTCTCAGTCTGTGCCTCAAGGATCGAGTACCAAAGCTTTTGAGCCT 1829 Query 66204 TCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATT 66263 | | || || || | || | | ||||| | ||||| | || || | Sbjct 1830 TGATGGTGCGCTTGCCCTTGCCCTCCCTCTCGTACTTCTCGTACAATGCCTCAAATTCCT 1889 Query 66264 CACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCAT 66323 |||| | |||| || | || |||| | |||||||| || | ||| || |||| Sbjct 1890 CACCATAGCAGTCGGCAAGGCCAGGGCACTCATTAGGACACATGAGTGTCCACTCGCCAT 1949 Query 66324 CCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 | || ||||| ||| || ||||| || ||||| || ||| ||| ||||| || | Sbjct 1950 TTTTCTCGACACGCTTCATGAAGAGATCCGGAATCCAAAGAGCGAGGAAAAGATCACGGG 2009 Query 66384 CTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCAT 66443 | || |||||| |||| || || || || | |||||||||||||||| ||| | | Sbjct 2010 CACGAACCTCCTCTTTGCCATGGTTCTTACGGAGATCGAGGAACTCAAAGACGTCTGAGT 2069 Query 66444 GCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGT 66503 |||| ||||| ||||| |||||||| | || ||| || |||||||||||| |||| Sbjct 2070 GCCAGGGTTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTGCCACCTTGGTCAACGT 2129 Query 66504 AGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 |||| || ||||||||||| || | ||| || || || || || || |||| |||| Sbjct 2130 AGCGGGCAGTGTTGTTGAAGACCCGGAGCATAGGCACAAGGCCATTGGAGGTGCCGTTGG 2189 Query 66564 TGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGG 66623 ||||| | ||| || || ||||| || ||||||||| || ||||| ||||| | Sbjct 2190 TGCCGGCAATGTAAGAGCCAGTAGCCCGAATTCGGTGAACATTGAGGCCAATGCCACCAG 2249 Query 66624 CCGTCTTCGAGATGGCAGCACAA-TC-GGCCACTGTCCGGAATATGCCGTCAATGGAGTC 66681 || | || ||||| ||| ||| || | |||| | ||||| |||||| ||| Sbjct 2250 CCATTTTGGAGATCATAGCGCAAGTCTTGAGCGTGTC--ATAGATGCCATCAATGCTGTC 2307 Query 66682 ACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAA 66741 | | || ||| | || |||| || || || | || || || | || ||| Sbjct 2308 ATCTTTCATGTCGACAAGAAAGCAAGACGATAGCTGAGCTTGAGGGGTACCAGCATTGAA 2367 Query 66742 GAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGAC 66801 ||| ||||||| ||||| || || | | || |||||| ||||| ||||| || || Sbjct 2368 GAGCGTGGGTGAGGCGTGAGTGAAAAACTTGCTCGACATGAGGTTGTAGGTCTCAATAAC 2427 Query 66802 AGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCG 66861 ||||| || || || || |||| || ||||| | | || || || || Sbjct 2428 GCGCTCAATATTGTCACCCCAGATGCCGACAGCGACGCGCATAATCATGTGCTGTGGACG 2487 Query 66862 TTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAA 66921 || || | | | |||| | | | ||| || || ||||||||||||| ||||| Sbjct 2488 CTCAACAATCTTGCCGTTGAGCTTGAGCAGGTATGATCGCTCCAGGGTCTTGAAGCCAAA 2547 Query 66922 GTACGAGTAATTGAAATC 66939 ||| ||| |||||||| Sbjct 2548 GTATTGGTAGTTGAAATC 2565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397539625571840