Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq336 104 1e-16 seq5607 86.0 3e-11 >seq336 Length=33492 Score = 104 bits (114), Expect = 1e-16 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 349081 AATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTG 349140 ||| |||||||| | |||| || ||||| |||||||||| || || || |||||||| Sbjct 30477 AATTTCCTTGAGACGCGGCACACCAAGGGTAACGTTCTTGGACGAAACACCAGCAAAGTG 30418 Query 349141 GAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCC 349200 ||| || | || |||| ||| ||| |||||| || ||| ||||| | || |||| ||| Sbjct 30417 GAAAGTGTTCAGTGTCATCTGTGTGGCGGGCTCACCAATGGACTGGGCAGCAAGGACGCC 30358 Query 349201 TACCATCTCGCCGGG 349215 ||||| |||||||| Sbjct 30357 AACCATTTCGCCGGG 30343 >seq5607 Length=30030 Score = 86.0 bits (94), Expect = 3e-11 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774 ||||||| || | ||| || || || ||||| ||||| | |||||| || ||||| | Sbjct 20740 AGATGCGCTCAATGATCAGCTGAGCAATGCGGTCGCCCTCCTTGATCTCGAAGTCGGTCT 20681 Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834 | | |||||||||||| | ||| ||||| ||| | || | ||||| ||| |||| Sbjct 20680 CGGCGTGGTTGAAGAGAAGAACCTTGACCTGGCCACGGTAGTCAGCGTCGATGACGCCGG 20621 Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCC 21889 | ||| ||||| |||||| | ||||| ||||| | || || | |||||| Sbjct 20620 CACCGGTGTCGATGAAGTTCTTGGAAGCCAGGCCCGAGCGAGGGGCAATGCGGCC 20566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084578966945088