Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_031108.1 Length=39640 Score E Sequences producing significant alignments: (Bits) Value seq3799 235 1e-57 >seq3799 Length=423 Score = 235 bits (260), Expect = 1e-57 Identities = 265/355 (75%), Gaps = 0/355 (0%) Strand=Plus/Plus Query 9494 AGCCAGGTCTTGAACGCCGCCTTCGACCGGCCCTCGACCATGTCCAGCAGCCTTGCTGGG 9553 ||||| || |||| | | ||||| |||| ||| || |||||| ||||| | || ||| Sbjct 27 AGCCATGTTTTGATCACGGCCTTGGACCTGCCAGGGAGCATGTCGAGCAGGCGGGCCGGG 86 Query 9554 CCGGCGCCATCGCGGACCGGGGTGAGGTCGATGATCACGGTGACGTACTTGTCGCCACGC 9613 ||| | | || || |||||||||||||||||||| || || ||||| ||| |||| Sbjct 87 CCGACCCTGTCACGCACCGGGGTGAGGTCGATGATGACCGTCACGTAGTTGCCGCCGTAG 146 Query 9614 CTGGTGTGGCGCCAGACGTGCTCATCGACGCCAATGACCTTCACGCCCTCAAACCGCGTG 9673 | |||||| ||||| |||||||| ||||| || || ||| ||||| | ||||| ||| Sbjct 147 CGGGTGTGTCGCCATACGTGCTCGTCGACACCGATCACCGCGACGCCGTGGAACCGGGTG 206 Query 9674 GGGTCGTTGATCAGCAGCCGCTTGCCTTCAGCCAGGACCGCGTTGTTGGCGGTGTCCCAC 9733 ||||||||||||||| | || | ||||| | ||||||||||| ||| ||||||| |||| Sbjct 207 GGGTCGTTGATCAGCTGGCGGTGCCCTTCGGTCAGGACCGCGTCGTTCGCGGTGTTCCAC 266 Query 9734 GCGACCCCGAGTCCCTCGGCGACACGGGCGACGGTGAGGTGTGCGACCACGATCCCTTCC 9793 ||||||||||| ||| | |||| || | ||| ||||||| | || ||| | Sbjct 267 GCGACCCCGAGCCCCGCCGCGATCCGCGACACGCTGAGGTGGTCCACGCCGAGAGCGCGT 326 Query 9794 AGCGCCCACCGCAGCCCGGTGCGCGAGAGCTTCGCGCGTGGCTCCGCCGCGGCGC 9848 || |||||| || || ||||||| |||||| ||||| || ||||| |||| Sbjct 327 AGTGCCCACGCGAGTCCACCCCGCGAGATCTTCGCCCGTGGATCGGCCGCAGCGC 381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126717587446144