Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001605845.1_202016-04-01] 5,856 sequences; 32,778,109 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq5140 104 9e-17 >seq5140 Length=28023 Score = 104 bits (114), Expect = 9e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 |||| ||||||||||| ||||||| | |||||||||||||||| || || | || | Sbjct 24049 CAATTGTCATACGAGACGGAATGGCGTGAGGGTTGATGATGATATCTGGAGTGACACCTT 24108 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | |||||||||||| ||||| | || ||| ||| || |||||||| || ||| Sbjct 24109 CGCGGGTAAAGGGCATGTCTTCTTGGCGATAAGTGACACCGATAGTTCCCTTCTGGCCAT 24168 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 |||||| || |||||||| ||||| Sbjct 24169 GGCGAGAGGCGAACTTGTCTCCAAT 24193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884744976973408