Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarocladium_20oryzae_20[genbank_20GCA_5F001972265.1_202016-12-09]
47 sequences; 32,403,370 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq6 104 1e-16
seq7 86.0 3e-11
>seq6
Length=2850886
Score = 104 bits (114), Expect = 1e-16
Identities = 104/135 (77%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 349081 AATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTG 349140
||| |||||||| | |||| || ||||| |||||||||| || || || ||||||||
Sbjct 930317 AATTTCCTTGAGACGCGGCACACCAAGGGTAACGTTCTTGGACGAAACACCAGCAAAGTG 930376
Query 349141 GAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCC 349200
||| || | || |||| ||| ||| |||||| || ||| ||||| | || |||| |||
Sbjct 930377 GAAAGTGTTCAGTGTCATCTGTGTGGCGGGCTCACCAATGGACTGGGCAGCAAGGACGCC 930436
Query 349201 TACCATCTCGCCGGG 349215
||||| ||||||||
Sbjct 930437 AACCATTTCGCCGGG 930451
>seq7
Length=2734572
Score = 86.0 bits (94), Expect = 3e-11
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 21715 AGATGCGTTCCAGGATGAGTTGGGCGATGCGATCGCCATGCTTGATTTCAAAGTCCTGGT 21774
||||||| || | ||| || || || ||||| ||||| | |||||| || ||||| |
Sbjct 1468295 AGATGCGCTCAATGATCAGCTGAGCAATGCGGTCGCCCTCCTTGATCTCGAAGTCGGTCT 1468236
Query 21775 CAGAGTGGTTGAAGAGCACCACCCCGACCTTGCCCCTATAAGAACTGTCGACGACCCCGG 21834
| | |||||||||||| | ||| ||||| ||| | || | ||||| ||| ||||
Sbjct 1468235 CGGCGTGGTTGAAGAGAAGAACCTTGACCTGGCCACGGTAGTCAGCGTCGATGACGCCGG 1468176
Query 21835 CGCCGACGTCGAGCCCGTTCTTCAAGGCCAGACCCGATCTGGGAGCGACGCGGCC 21889
| ||| ||||| |||||| | ||||| ||||| | || || | ||||||
Sbjct 1468175 CACCGGTGTCGATGAAGTTCTTGGAAGCCAGGCCCGAGCGAGGGGCAATGCGGCC 1468121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084737913976506
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |