Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq106 345 7e-93 seq91 127 3e-27 >seq106 Length=260114 Score = 345 bits (382), Expect = 7e-93 Identities = 199/204 (98%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 255153 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 255094 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct 255093 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCC 255034 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 255033 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACCCCGAGGGACTAAAGGATCGATAGGC 254974 Query 272 CACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||| Sbjct 254973 CACACTTTCATGGTTTGTATTCAC 254950 Score = 136 bits (150), Expect = 7e-30 Identities = 86/92 (93%), Gaps = 1/92 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| |||||||||||| ||||| | |||||||||||||||||||||||||||||| Sbjct 255631 TACTGAGCTGAATTACCATTGCGGCGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 255573 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||||||||| Sbjct 255572 CGACGGTCTAAACCCAGCTCACGTTCCCTATT 255541 >seq91 Length=632986 Score = 127 bits (140), Expect = 3e-27 Identities = 88/100 (88%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166 ||||||||||||||||||| ||| | || |||| |||||| ||||||||||||||| ||| Sbjct 183148 CCAACGCTTACCGAATTCTACTTTGATAGGATAAGAAGAGGCGACATCGAAGGATCTAAA 183089 Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 || | |||||| |||||||||||||||||||||||||| Sbjct 183088 AGTGATGTCGCTGCGAACGCTTGGCTGCCACAAGCCAGTT 183049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398496256