Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07-
21] 176 sequences; 43,437,139 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq106 726 0.0
seq121 237 5e-60
seq123 86.0 2e-14
>seq106
Length=260114
Score = 726 bits (804), Expect = 0.0
Identities = 464/504 (92%), Gaps = 1/504 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 258626 GTACTCATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 258567
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 258566 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 258507
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 258506 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGCGA 258447
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
| || | | | |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 258446 AGACAAGACCTTCGCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 258387
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| ||||||| ||||||||||| | ||||||||||||||||||
Sbjct 258386 CAAGGCCATGCGATTCGAAAAGTTATCATGAATCACCACGAAGCCCCGAAGGGCGTTGGC 258327
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 258326 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 258267
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||| |||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct 258266 AATTACCACAGTTATCCATGTAGTAATGTGCTATCAAATAAACGATAACTTATATAATGA 258207
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 258206 GCCATTCGCAGTTTCGCGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 258148
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 258147 AGACAAGCATATGACTACTGGCAG 258124
Score = 251 bits (278), Expect = 2e-64
Identities = 188/223 (84%), Gaps = 13/223 (6%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249591 GTACTCATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 249532
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 249531 CCCCGTGTCGGGATTG-------------CCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 249485
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| |
Sbjct 249484 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGCGA 249425
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGA 223
| || | | | |||||||||||||||||| ||||||||||
Sbjct 249424 AGACAAGACCTTCGCATCGAAAGTTGATAGGGAAGAAATTTGA 249382
>seq121
Length=2448542
Score = 237 bits (262), Expect = 5e-60
Identities = 136/139 (98%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2393369 GTACTCATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 2393428
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2393429 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 2393488
Query 121 TCTCAGGCTCCCTCTCCGG 139
||||||||||| |||||||
Sbjct 2393489 TCTCAGGCTCCTTCTCCGG 2393507
Score = 197 bits (218), Expect = 4e-48
Identities = 115/119 (97%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 22 CCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAA 81
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2393621 CCAAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAA 2393562
Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGA 140
||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 2393561 TTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTTTCTCAGGCTCCTTCCCCGGA 2393503
>seq123
Length=69366
Score = 86.0 bits (94), Expect = 2e-14
Identities = 49/50 (98%), Gaps = 0/50 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATT 50
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 38326 GTACTCATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATT 38375
Score = 80.6 bits (88), Expect = 8e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 116
|| ||| ||||||||||||||||||||||||||||||||| |||||| ||| | |||||
Sbjct 39311 CCCCCCGGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCGTTCCTTAGATATAGTAGC 39253
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510397341696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |