Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F000732125.1_202014-07- 21] 176 sequences; 43,437,139 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq106 726 0.0 seq121 237 5e-60 seq123 86.0 2e-14 >seq106 Length=260114 Score = 726 bits (804), Expect = 0.0 Identities = 464/504 (92%), Gaps = 1/504 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 258626 GTACTCATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 258567 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 258566 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 258507 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 258506 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGCGA 258447 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | || | | | |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 258446 AGACAAGACCTTCGCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCCGGCG 258387 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| ||||||| ||||||||||| | |||||||||||||||||| Sbjct 258386 CAAGGCCATGCGATTCGAAAAGTTATCATGAATCACCACGAAGCCCCGAAGGGCGTTGGC 258327 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 258326 TTTTAATCTAATAAATACATCCCTTCCGAAGTCGGGATTTTTAGCATGTATTAGCTCTAG 258267 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||| |||||||||||||||| || |||||||||||||||||||| || |||||| Sbjct 258266 AATTACCACAGTTATCCATGTAGTAATGTGCTATCAAATAAACGATAACTTATATAATGA 258207 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| Sbjct 258206 GCCATTCGCAGTTTCGCGGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 258148 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 258147 AGACAAGCATATGACTACTGGCAG 258124 Score = 251 bits (278), Expect = 2e-64 Identities = 188/223 (84%), Gaps = 13/223 (6%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 249591 GTACTCATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 249532 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 249531 CCCCGTGTCGGGATTG-------------CCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 249485 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||| ||||||| |||| |||||| | ||||||||||||| |||||| | Sbjct 249484 TCTCAGGCTCCTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGCAACCATGCGA 249425 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGA 223 | || | | | |||||||||||||||||| |||||||||| Sbjct 249424 AGACAAGACCTTCGCATCGAAAGTTGATAGGGAAGAAATTTGA 249382 >seq121 Length=2448542 Score = 237 bits (262), Expect = 5e-60 Identities = 136/139 (98%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2393369 GTACTCATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 2393428 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2393429 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTT 2393488 Query 121 TCTCAGGCTCCCTCTCCGG 139 ||||||||||| ||||||| Sbjct 2393489 TCTCAGGCTCCTTCTCCGG 2393507 Score = 197 bits (218), Expect = 4e-48 Identities = 115/119 (97%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 22 CCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAA 81 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2393621 CCAAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAA 2393562 Query 82 TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGA 140 ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct 2393561 TTTGCGCGCCTGCTGCCTTCCTTGGATGTAGTAGCCGTTTCTCAGGCTCCTTCCCCGGA 2393503 >seq123 Length=69366 Score = 86.0 bits (94), Expect = 2e-14 Identities = 49/50 (98%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATT 50 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 38326 GTACTCATTCCGATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATT 38375 Score = 80.6 bits (88), Expect = 8e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGC 116 || ||| ||||||||||||||||||||||||||||||||| |||||| ||| | ||||| Sbjct 39311 CCCCCCGGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCGTTCCTTAGATATAGTAGC 39253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397341696