Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq98 313 5e-83
seq201 232 1e-58
seq62 159 6e-37
>seq98
Length=384
Score = 313 bits (346), Expect = 5e-83
Identities = 222/251 (88%), Gaps = 5/251 (2%)
Strand=Plus/Minus
Query 15 GGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTT 74
|||||||||||||||| | || | |||| ||| | | || || |||||||||
Sbjct 247 GGGCCTTTCCTTCTGGCTAACCTTGAGTCCTTG--TGGCTCTT--GGCGAACCAGGACTT 192
Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGA 133
|||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||
Sbjct 191 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGA 132
Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193
||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 131 ATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAA 72
Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 71 TAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 12
Query 254 AGACTAACTAC 264
|||||||||||
Sbjct 11 AGACTAACTAC 1
>seq201
Length=1935873
Score = 232 bits (256), Expect = 1e-58
Identities = 158/178 (89%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGGA 64
|| ||| ||||||||||||| |||| ||| || |||| |||||||||| ||| ||||||
Sbjct 465619 TGATCCAGCCGGGCCTTTCCCTCTGTGGAACCCCATGGCCTTCACTGGCGGTGGCGGGGA 465678
Query 65 GCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACAT 124
||| |||||||||| ||||||||||||||| || | |||||||| |||||||||||||
Sbjct 465679 AACAGAACTTTTACTTCGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATACAT 465738
Query 125 TAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 465739 TAGCATGGAATAATAGAATAGGACATGTGGTTCTATTTTGTTGGTTTCTAGGACCGCC 465796
>seq62
Length=867
Score = 159 bits (176), Expect = 6e-37
Identities = 104/113 (92%), Gaps = 1/113 (1%)
Strand=Plus/Plus
Query 206 GGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACT 265
|||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1 GGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATCTATTGAAGACTAACTACT 60
Query 266 GCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
|||||||| || ||||||||||||||||| || || ||||||||||||||||
Sbjct 61 GCGAAAGCATTTGCCAAGGATGTTTTCATTGATAAG-GAACGAAAGTTAGGGG 112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915198068928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |