Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05- 26] 211 sequences; 44,221,183 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq128 728 0.0 seq92 244 4e-62 >seq128 Length=230351 Score = 728 bits (806), Expect = 0.0 Identities = 573/675 (85%), Gaps = 16/675 (2%) Strand=Plus/Plus Query 14 GCCTAGCCG-TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG 72 ||| |||| ||| |||||||||||||||||||||| |||||||||||| |||| ||||| Sbjct 49540 GCCGAGCCTCTGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCAAAATG 49599 Query 73 GGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGT 132 ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 49600 GGAGGTAAACCCCTTCTAAAGCTAAATACTGGCCAGAGACCGATAGCGCACAAGTAGAGT 49659 Query 133 GATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAG 192 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 49660 GATCGAAAGATGAAAAGCACTTTGAAAAGAGAGTTAAATAGCACGTGAAATTGTTGAAAG 49719 Query 193 GGAAGCGCTTGCAACCAGACTTGCCCGCAGTTG-CTCAACCGGCCCCTCGGCCGGTGCAC 251 |||||||||||| |||||||||| | | || | ||| || ||| |||| | | || | Sbjct 49720 GGAAGCGCTTGCGACCAGACTTGTGC-CCGTCGAATCAGCC-GCCGCTCGCCGGCGGCGC 49777 Query 252 TCTTCTGCGG--TCAGGCCAGCATCAGCTCG-GGCGGTCGGATAAAGGCCCCGGGAATGT 308 |||| |||| ||||||||||||||| ||| || | ||| |||||| ||||||||| Sbjct 49778 ACTTCGGCGGGCTCAGGCCAGCATCAGTTCGCTGCAGGGGGAGAAAGGCGGCGGGAATGT 49837 Query 309 GGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCC 368 || | |||| || ||||||||||||| | | ||| | | || | ||||||||| || Sbjct 49838 GG--CTCTTC--GGAGTGTTATAGCCCGCCGCGCAATACCCCTCGGC-GGACTGAGGACC 49892 Query 369 GCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCA 428 |||| | || ||||||||||||||||||| || |||| ||||||||| ||||||||||| Sbjct 49893 GCGCATCTGCAAGGATGCTGGCGTAATGGTCGTCAGCGACCCGTCTTGAAACACGGACCA 49952 Query 429 AGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAA 488 ||||||| | |||||||||||| |||||| |||||| ||||||||||||||||||| Sbjct 49953 AGGAGTCGTCCTAATATGCGAGTGTTCGGGTGTAAAACCCCTGCGCGTAATGAAAGTGAA 50012 Query 489 CGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTT 548 |||||||| || | || ||| ||||||||||||||||||| |||||||||||| Sbjct 50013 CGGAGGTGAGA----GCTTCGGCGCATCATCGACCGATCCTGATGTTCTCGGATGGATTT 50068 Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||||||||||||| | |||||||||||| ||||||||||||||| ||||||| ||| Sbjct 50069 GAGTAAGAGCATATTGGGCCGGACCCGAAAGAAGGTGAACTATGCCTGTATAGGGTAAAG 50128 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 50129 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATA 50188 Query 669 TGGGTATAGGGGCGA 683 |||| || ||||||| Sbjct 50189 TGGGCATGGGGGCGA 50203 >seq92 Length=447 Score = 244 bits (270), Expect = 4e-62 Identities = 161/178 (90%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 184 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 243 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 244 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 303 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || Sbjct 304 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGC 361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995474050