Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20apiospermum_20[genbank_20GCA_5F002158515.1_202017-05-
26] 211 sequences; 44,221,183 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq128 219 7e-55
seq105 132 8e-29
>seq128
Length=230351
Score = 219 bits (242), Expect = 7e-55
Identities = 221/279 (79%), Gaps = 9/279 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 52804 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 52861
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 52862 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 52921
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||| | || ||| || |||| || ||| |||| | ||||||||| |||| |
Sbjct 52922 GAAAGCGGCGAT--ATACCCGCACGTC-TAGACGGACAAGAATAGGCTCCGGCTTAGTGT 52978
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||| ||| | | | || | || |||| || |||| | | | ||| ||||
Sbjct 52979 CTTAGCGGGC--GGATGGTCCGCCAGGCTCGAAGTGCCTGGCGGTGA-TTCGCGAATTGT 53035
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| |||| ||||| |||||||||||||||||
Sbjct 53036 AATTTCGATGCGCGCGGGGATGAATCCTTTGCAGACGAC 53074
>seq105
Length=335
Score = 132 bits (146), Expect = 8e-29
Identities = 162/215 (75%), Gaps = 16/215 (7%)
Strand=Plus/Minus
Query 79 GCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCT 137
|||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| |
Sbjct 334 GCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTT 275
Query 138 CCT--GCACATCGTAGTCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGC 186
|| |||| ||| |||||||||| |||| | || | | ||||| ||||
Sbjct 274 GCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGC 215
Query 187 AGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATT 243
|||| ||||||| || |||||| || ||| ||| ||||||| ||||||||
Sbjct 214 AGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATG 156
Query 244 TCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||| |||| |||||||||| |||| | |||||
Sbjct 155 TCATTTTGCGTGGGGATAAATCATTTGTATACGAC 121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819198325504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |