Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19]
587 sequences; 43,301,991 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq486 333 5e-89
seq108 275 1e-71
seq401 96.9 6e-18
>seq486
Length=2657
Score = 333 bits (368), Expect = 5e-89
Identities = 198/206 (96%), Gaps = 1/206 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||| ||| |||||||||||| ||||| | ||||||||||||||||||||||||||||||
Sbjct 1207 TACTGAGCTGAATTACCATTGCGGCGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 1265
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1325
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1326 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 1385
Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206
||||||||||| ||||||||||||||
Sbjct 1386 GAACGCTTGGCCGCCACAAGCCAGTT 1411
Score = 149 bits (164), Expect = 1e-33
Identities = 90/94 (96%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 203 AGTTA-TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1889 AGTTAATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACCCCGAGGGACTAAAGG 1948
Query 262 ATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||
Sbjct 1949 ATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1982
>seq108
Length=126276
Score = 275 bits (304), Expect = 1e-71
Identities = 189/213 (89%), Gaps = 9/213 (4%)
Strand=Plus/Minus
Query 2 ACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCAT 61
||| ||| |||||||||| | ||||| | |||| |||||||||||||||||||||||||
Sbjct 46130 ACTGAGCTGAATTACCATCGCGGCGA-GCTCATTAGTAGGGTAAAACTAACCTGTCTCAC 46072
Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG--------GTGAACAATCCAACGC 113
||| |||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 46071 GACAGTCTAAACCCAGCTCACGTTCCCTATTAGTGGAATAGTGGGTGAACAATCCAACAC 46012
Query 114 TTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACG 173
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct 46011 TTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAATAAGCGACG 45952
Query 174 TCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206
|||| |||| |||||||| |||||||||| |||
Sbjct 45951 TCGCCATGAGCGCTTGGCCGCCACAAGCCGGTT 45919
>seq401
Length=16732
Score = 96.9 bits (106), Expect = 6e-18
Identities = 72/83 (87%), Gaps = 1/83 (1%)
Strand=Plus/Minus
Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||||||||| ||||| | ||||| ||||||| |||||||||||||| | || || |
Sbjct 8138 GAATTACCATTGCGGCGA-GTTCATCGGTAGGGTGAAACTAACCTGTCTTACGATAGTAT 8080
Query 70 AAACCCAGCTCACGTTCCCTATT 92
|||||||||||||||||| ||||
Sbjct 8079 AAACCCAGCTCACGTTCCGTATT 8057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854394984672
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |