Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq486 333 5e-89 seq108 275 1e-71 seq401 96.9 6e-18 >seq486 Length=2657 Score = 333 bits (368), Expect = 5e-89 Identities = 198/206 (96%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||| ||| |||||||||||| ||||| | |||||||||||||||||||||||||||||| Sbjct 1207 TACTGAGCTGAATTACCATTGCGGCGA-GTTCATCAGTAGGGTAAAACTAACCTGTCTCA 1265 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1266 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 1325 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1326 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTAT 1385 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 ||||||||||| |||||||||||||| Sbjct 1386 GAACGCTTGGCCGCCACAAGCCAGTT 1411 Score = 149 bits (164), Expect = 1e-33 Identities = 90/94 (96%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 203 AGTTA-TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGG 261 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1889 AGTTAATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACCCCGAGGGACTAAAGG 1948 Query 262 ATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||| Sbjct 1949 ATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1982 >seq108 Length=126276 Score = 275 bits (304), Expect = 1e-71 Identities = 189/213 (89%), Gaps = 9/213 (4%) Strand=Plus/Minus Query 2 ACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCAT 61 ||| ||| |||||||||| | ||||| | |||| ||||||||||||||||||||||||| Sbjct 46130 ACTGAGCTGAATTACCATCGCGGCGA-GCTCATTAGTAGGGTAAAACTAACCTGTCTCAC 46072 Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG--------GTGAACAATCCAACGC 113 ||| |||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct 46071 GACAGTCTAAACCCAGCTCACGTTCCCTATTAGTGGAATAGTGGGTGAACAATCCAACAC 46012 Query 114 TTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACG 173 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 46011 TTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAATAAGCGACG 45952 Query 174 TCGCTATGAACGCTTGGCTGCCACAAGCCAGTT 206 |||| |||| |||||||| |||||||||| ||| Sbjct 45951 TCGCCATGAGCGCTTGGCCGCCACAAGCCGGTT 45919 >seq401 Length=16732 Score = 96.9 bits (106), Expect = 6e-18 Identities = 72/83 (87%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 10 GAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||||||||| ||||| | ||||| ||||||| |||||||||||||| | || || | Sbjct 8138 GAATTACCATTGCGGCGA-GTTCATCGGTAGGGTGAAACTAACCTGTCTTACGATAGTAT 8080 Query 70 AAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||| |||| Sbjct 8079 AAACCCAGCTCACGTTCCGTATT 8057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854394984672