Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19] 587 sequences; 43,301,991 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq486 219 7e-55 seq401 145 1e-32 >seq486 Length=2657 Score = 219 bits (242), Expect = 7e-55 Identities = 221/279 (79%), Gaps = 9/279 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| ||||||||||||||||||||| |||| |||||| Sbjct 1209 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1152 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1151 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1092 Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180 ||| | || ||| || |||| || ||| |||| | ||||||||| |||| | Sbjct 1091 GAAAGCGGCGAT--ATACCCGCACGTC-TAGACGGACAAGAATAGGCTCCGGCTTAGTGT 1035 Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239 |||||| ||| | | | || | || |||| || |||| | | | ||| |||| Sbjct 1034 CTTAGCGGGC--GGATGGTCCGCCAGGCTCGAAGTGCCTGGCGGTGA-TTCGCGAATTGT 978 Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| |||| ||||| ||||||||||||||||| Sbjct 977 AATTTCGATGCGCGCGGGGATGAATCCTTTGCAGACGAC 939 >seq401 Length=16732 Score = 145 bits (160), Expect = 1e-32 Identities = 105/119 (88%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64 |||||||||||| || || ||| |||||||||||||||||| ||| ||| ||||||||| Sbjct 8146 GAGAGGAACCGCTGATTT-AGA-TAATTGGTTTTTGCGGCTATCTAACCGAGCAGTGCCG 8203 Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123 || || ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 8204 TGACGCCACCATCTGCTGGAAACTGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 8262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819195341568