Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Scedosporium_20boydii_20[genbank_20GCA_5F002221725.1_202017-07-19]
587 sequences; 43,301,991 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq486 219 7e-55
seq401 145 1e-32
>seq486
Length=2657
Score = 219 bits (242), Expect = 7e-55
Identities = 221/279 (79%), Gaps = 9/279 (3%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| ||||||||||||||||||||| |||| ||||||
Sbjct 1209 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCCGACCGGGCAGT 1152
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1151 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 1092
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||| | || ||| || |||| || ||| |||| | ||||||||| |||| |
Sbjct 1091 GAAAGCGGCGAT--ATACCCGCACGTC-TAGACGGACAAGAATAGGCTCCGGCTTAGTGT 1035
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|||||| ||| | | | || | || |||| || |||| | | | ||| ||||
Sbjct 1034 CTTAGCGGGC--GGATGGTCCGCCAGGCTCGAAGTGCCTGGCGGTGA-TTCGCGAATTGT 978
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||||| |||| ||||| |||||||||||||||||
Sbjct 977 AATTTCGATGCGCGCGGGGATGAATCCTTTGCAGACGAC 939
>seq401
Length=16732
Score = 145 bits (160), Expect = 1e-32
Identities = 105/119 (88%), Gaps = 2/119 (2%)
Strand=Plus/Plus
Query 5 GAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCG 64
|||||||||||| || || ||| |||||||||||||||||| ||| ||| |||||||||
Sbjct 8146 GAGAGGAACCGCTGATTT-AGA-TAATTGGTTTTTGCGGCTATCTAACCGAGCAGTGCCG 8203
Query 65 CGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 123
|| || ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 8204 TGACGCCACCATCTGCTGGAAACTGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAA 8262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819195341568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |