Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq46 176 2e-41
seq62 165 3e-38
>seq46
Length=218779
Score = 176 bits (194), Expect = 2e-41
Identities = 114/125 (91%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 519 CGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAA 578
||||||||| ||||||||||||||||||||||||||||||||| | || |||||||||
Sbjct 130782 CGACCGATCTTGATGTCTTCGGATGGATTTGAGTAAGAGCATATTGGGTGCGACCCGAAA 130723
Query 579 GATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGC 638
|||| ||| |||| | |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 130722 GATGATGATCTATACGTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTAGCAGC 130663
Query 639 GGTTC 643
|||||
Sbjct 130662 GGTTC 130658
>seq62
Length=96712
Score = 165 bits (182), Expect = 3e-38
Identities = 123/144 (85%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 338 GGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGG 397
|||| |||| ||| | |||||||||| ||||||| ||||||||||||| ||||||| |
Sbjct 26202 GGTGCAATGTAGCCTACTTGGACTGAGGACCGCGCTTCGGCTAGGATGCTTGCGTAATAG 26143
Query 398 TTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGG 457
||||||||| ||||||||| ||||||||||||||||| || | |||||||||||||||
Sbjct 26142 TTGTAAGCGACCCGTCTTGAAACACGGACCAAGGAGTGTACCTAATATGCGAGTGTTTGG 26083
Query 458 GTGTCAAACCCGTGCGCGTAATGA 481
|||| |||||| | ||||||| ||
Sbjct 26082 GTGTTAAACCCATACGCGTAAAGA 26059
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079986636650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |