Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq111 102 2e-19
>seq111
Length=6653
Score = 102 bits (112), Expect = 2e-19
Identities = 195/283 (69%), Gaps = 12/283 (4%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||| | | ||||||||
Sbjct 6235 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 6176
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | || || ||| |||||||||||||
Sbjct 6175 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 6116
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTTCGCGTTAGC 182
|| | || | || ||||||| || | ||||| ||| |||| ||||| ||||
Sbjct 6115 CCCTCATAGGTAAGGCCGCCATTGATCGGGGTTTCCTTCAAATCCAAGCTT-ATATTAGT 6057
Query 183 TAACC----CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238
|||| ||| |||||| ||| || |||||| |||||| | |||| | |
Sbjct 6056 CAACCTAGAAAATCCGTTAACCAGCCGACATTGGGCAGAAATCACACTCAATACTTTGAT 5997
Query 239 TT-TCGTGT--TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| | | | ||||| |||||| |||||| | ||||||||||
Sbjct 5996 TTATTATCTTATTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 5954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260792145216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |