Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq111 102 2e-19 >seq111 Length=6653 Score = 102 bits (112), Expect = 2e-19 Identities = 195/283 (69%), Gaps = 12/283 (4%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 6235 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 6176 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | || || ||| ||||||||||||| Sbjct 6175 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGA 6116 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTTCGCGTTAGC 182 || | || | || ||||||| || | ||||| ||| |||| ||||| |||| Sbjct 6115 CCCTCATAGGTAAGGCCGCCATTGATCGGGGTTTCCTTCAAATCCAAGCTT-ATATTAGT 6057 Query 183 TAACC----CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 |||| ||| |||||| ||| || |||||| |||||| | |||| | | Sbjct 6056 CAACCTAGAAAATCCGTTAACCAGCCGACATTGGGCAGAAATCACACTCAATACTTTGAT 5997 Query 239 TT-TCGTGT--TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || | | | ||||| |||||| |||||| | |||||||||| Sbjct 5996 TTATTATCTTATTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 5954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260792145216