Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq6 150 3e-34
seq13 93.3 7e-17
>seq6
Length=1347266
Score = 150 bits (166), Expect = 3e-34
Identities = 96/103 (93%), Gaps = 1/103 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697578 ACTCGTTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 697637
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTC 104
| |||||||||||||||||||||| |||| | |||| ||||||
Sbjct 697638 CTTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTC 697679
>seq13
Length=1013014
Score = 93.3 bits (102), Expect = 7e-17
Identities = 86/107 (80%), Gaps = 8/107 (7%)
Strand=Plus/Minus
Query 94 AGCCAATAGTCCCTCTAAGAAGCCAGCCACCAA-CCA---TAGTCGATGGGGCTATTTAG 149
|||| |||||||||||| ||||||||| |||| ||| ||| || ||||||||||
Sbjct 2539 AGCCGATAGTCCCTCTAGGAAGCCAGCGACCAGTCCAAGCTAGCCG----GGCTATTTAG 2484
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTC 196
||||||||| ||||||| ||| ||| |||| | |||| ||||||||
Sbjct 2483 CAGGTTAAGATCTCGTTTGTTGTCGCAATTCAGCAGATCAATCACTC 2437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796795191063
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |