Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq23 410 2e-112
seq5 327 2e-87
seq24 84.2 4e-14
>seq23
Length=668645
Score = 410 bits (454), Expect = 2e-112
Identities = 268/295 (91%), Gaps = 0/295 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
|||||||| |||||| |||| ||||| | ||||||||||||||||||||||||||||||
Sbjct 612402 TACTAAGCTGAATTATTATTGCGGCGATGATCATCAGTAGGGTAAAACTAACCTGTCTCA 612461
Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 612462 CGATGGTCTAAACCCAGCTCATGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 612521
Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||
Sbjct 612522 ATTCTGCTTCGGTATGATAGGAAGAGCCGATATCGAAGGATCAAAAAGCAACATCGTTAT 612581
Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240
|||| |||||||| | || |||||||||||| | | ||||||||||| |||| ||||||
Sbjct 612582 AAACGTTTGGCTGCTATAAACCAGTTATCCCTATAGCAACTTTTCTGGTACCTTTAGCCT 612641
Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||| |||||| ||||||||||||| |||| ||||||||| |||||||||||
Sbjct 612642 CAAATTTTGAGGGATTAAAGGATCGATAAGCCATACTTTCATGATTTGTATTCAC 612696
>seq5
Length=1928780
Score = 327 bits (362), Expect = 2e-87
Identities = 195/206 (95%), Gaps = 10/206 (5%)
Strand=Plus/Plus
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 928324 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA------- 928376
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 928377 ---TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 928433
Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 928434 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAAGATCGATAG 928493
Query 270 GCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||
Sbjct 928494 GCCACACTTTCATGGTTTGTATTCAC 928519
>seq24
Length=546725
Score = 84.2 bits (92), Expect = 4e-14
Identities = 49/51 (96%), Gaps = 0/51 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAA 51
|||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct 345060 TACTAAGCTGAATTACCATTGCGGCGACGGTCATCAGTAGGGTAAAACTAA 345110
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854394677088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |