Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq23 410 2e-112 seq5 327 2e-87 seq24 84.2 4e-14 >seq23 Length=668645 Score = 410 bits (454), Expect = 2e-112 Identities = 268/295 (91%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 |||||||| |||||| |||| ||||| | |||||||||||||||||||||||||||||| Sbjct 612402 TACTAAGCTGAATTATTATTGCGGCGATGATCATCAGTAGGGTAAAACTAACCTGTCTCA 612461 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 612462 CGATGGTCTAAACCCAGCTCATGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 612521 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||| Sbjct 612522 ATTCTGCTTCGGTATGATAGGAAGAGCCGATATCGAAGGATCAAAAAGCAACATCGTTAT 612581 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 |||| |||||||| | || |||||||||||| | | ||||||||||| |||| |||||| Sbjct 612582 AAACGTTTGGCTGCTATAAACCAGTTATCCCTATAGCAACTTTTCTGGTACCTTTAGCCT 612641 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||| |||||| ||||||||||||| |||| ||||||||| ||||||||||| Sbjct 612642 CAAATTTTGAGGGATTAAAGGATCGATAAGCCATACTTTCATGATTTGTATTCAC 612696 >seq5 Length=1928780 Score = 327 bits (362), Expect = 2e-87 Identities = 195/206 (95%), Gaps = 10/206 (5%) Strand=Plus/Plus Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 928324 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGA------- 928376 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 928377 ---TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 928433 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 928434 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAAGATCGATAG 928493 Query 270 GCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||| Sbjct 928494 GCCACACTTTCATGGTTTGTATTCAC 928519 >seq24 Length=546725 Score = 84.2 bits (92), Expect = 4e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAA 51 |||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct 345060 TACTAAGCTGAATTACCATTGCGGCGACGGTCATCAGTAGGGTAAAACTAA 345110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854394677088