Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq52 100 9e-19 seq5 95.1 4e-17 seq23 93.3 1e-16 >seq52 Length=167936 Score = 100 bits (110), Expect = 9e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 333 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCA 392 |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct 94957 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGATAGTGGGAATGTCGTTAATCCA 94898 >seq5 Length=1928780 Score = 95.1 bits (104), Expect = 4e-17 Identities = 81/99 (82%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 444 TCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC-ATTCAG 502 ||||||||||||| |||||||||| || | | |||||| | |||||||||| ||||| Sbjct 743054 TCATAGTTACTCCTGCCGTTTACCGTCGTTCGATTGAATAACCTCACTTTGACAATTCAA 742995 Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541 ||||| |||| ||||| | ||||||||| | ||||||| Sbjct 742994 AGCACCAGGCAAAAATCCCCTTGCGTCAATACCACTTTC 742956 >seq23 Length=668645 Score = 93.3 bits (102), Expect = 1e-16 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 612728 CTTTTGTTCTACTAGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 612786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635189812704