Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31]
623 sequences; 41,098,534 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq52 100 9e-19
seq5 95.1 4e-17
seq23 93.3 1e-16
>seq52
Length=167936
Score = 100 bits (110), Expect = 9e-19
Identities = 58/60 (97%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 333 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCA 392
|||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 94957 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGATAGTGGGAATGTCGTTAATCCA 94898
>seq5
Length=1928780
Score = 95.1 bits (104), Expect = 4e-17
Identities = 81/99 (82%), Gaps = 1/99 (1%)
Strand=Plus/Minus
Query 444 TCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC-ATTCAG 502
||||||||||||| |||||||||| || | | |||||| | |||||||||| |||||
Sbjct 743054 TCATAGTTACTCCTGCCGTTTACCGTCGTTCGATTGAATAACCTCACTTTGACAATTCAA 742995
Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541
||||| |||| ||||| | ||||||||| | |||||||
Sbjct 742994 AGCACCAGGCAAAAATCCCCTTGCGTCAATACCACTTTC 742956
>seq23
Length=668645
Score = 93.3 bits (102), Expect = 1e-16
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 612728 CTTTTGTTCTACTAGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 612786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635189812704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |