Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerotinia_20glacialis_20[genbank_20GCA_5F002162575.1_202017-05-31] 623 sequences; 41,098,534 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq24 168 1e-39 seq23 167 4e-39 >seq24 Length=546725 Score = 168 bits (186), Expect = 1e-39 Identities = 106/112 (95%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || |||||| |||||||||||||||||||||||| ||||||| Sbjct 345062 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGAGAAGGCAGT 345005 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 345004 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAAT 344953 >seq23 Length=668645 Score = 167 bits (184), Expect = 4e-39 Identities = 208/280 (74%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||| | ||||||| | |||||||| ||||||| |||||||||| ||| || | || | Sbjct 612404 GTACAAAAGGAACCACT-AATTCAGA-TAATTGGGTTTTGCGGCTATCTAACAAAACAAT 612347 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCT-AAGTCAGAATCCATGCC 119 || |||||||||||||||||||||| || |||||||||||| || ||||||||||| || Sbjct 612346 GCTGCGAAGCTACCATCTGCTGGATAATAACTGAACGCCTCTAAAATCAGAATCCATACC 612287 Query 120 AGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAAT-AGGCTTCGGCCCCGA 178 |||| |||||| || ||||||||| |||||||||||| || ||| ||||| || Sbjct 612286 AGAAAACAGTGATTTATACCCACACATCGTAATCGGATACGAATAAGCCTTTGGCCCTGA 612227 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238 | |||||| ||| |||| | | | ||| | | | | | || || ||| Sbjct 612226 ATCTTAGCTGGCTAATAACGATCCTATTGAAGAAACTCTTTAGGATTAACTAACGTTTTG 612167 Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 |||||| || || | |||| | ||||||||||| || || Sbjct 612166 CAATTTTACAATACATAGGGTTGAATCCTTTGCATACAAC 612127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819195055872